DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and SWF1

DIOPT Version :10

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_010411.1 Gene:SWF1 / 851704 SGDID:S000002533 Length:336 Species:Saccharomyces cerevisiae


Alignment Length:328 Identity:72/328 - (21%)
Similarity:111/328 - (33%) Gaps:125/328 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 VLMLTLVGFTIWGMELAKRTATRTNFFLSWLVFSVFYMIIIFEFQVP------LLELAPEENYAL 182
            :|.:.|:||.:        ....:..|.|...||.||..:...|.|.      .|.|.|      
Yeast     5 LLFVLLIGFVV--------LILLSPVFKSTWPFSTFYRNVFQPFLVDDQKYRWKLHLVP------ 55

  Fly   183 MFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDEL---------------P---GIAEASSGEEQ 229
            :|::...||.:|:         ...:..:|.|:||               |   ||....|..|.
Yeast    56 LFYTSIYLYLVYT---------YHMRVESTIKNELFLLERILIVPIIILPPVALGILAMVSRAED 111

  Fly   230 AEAQTTLQMESVLSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRAYHCPVCGTCVKRRDH 294
            ::              |.:.|..:......|::.....|..||.|.|.|:.||.:|..||...||
Yeast   112 SK--------------DHKSGSTEEYPYDYLLYYPAIKCSTCRIVKPARSKHCSICNRCVLVADH 162

  Fly   295 HSYWLNCCIGERNY--------------------VWYIVGLALSEIALLLGANLTLTSICHPFMV 339
            |..|:|.|||:.||                    :|||   :|:..:.|..|.||||.:|..|.:
Yeast   163 HCIWINNCIGKGNYLQFYLFLISNIFSMCYAFLRLWYI---SLNSTSTLPRAVLTLTILCGCFTI 224

  Fly   340 VRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYL------WWKGSTLHE 398
            :            |:                    |.:|:...:.::...      |:   |:.|
Yeast   225 I------------CA--------------------IFTYLQLAIVKEGMTTNEQDKWY---TIQE 254

  Fly   399 YKR 401
            |.|
Yeast   255 YMR 257

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 DHHC 262..399 CDD:396215 38/162 (23%)
SWF1NP_010411.1 COG5273 22..336 CDD:227598 68/303 (22%)

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