DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and ERF2

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_013347.1 Gene:ERF2 / 850947 SGDID:S000004236 Length:359 Species:Saccharomyces cerevisiae


Alignment Length:135 Identity:40/135 - (29%)
Similarity:58/135 - (42%) Gaps:25/135 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   268 CEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIV---GLALSEIALLLGANLT 329
            |..||...|.|:.||..|..||...|||..|:|.|||:|||.::::   |..||.:.||....: 
Yeast   175 CPSCRIWRPPRSSHCSTCNVCVMVHDHHCIWVNNCIGKRNYRFFLIFLLGAILSSVILLTNCAI- 238

  Fly   330 LTSICHPFMVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYLWWKGS 394
                 |   :.|..|.    |.||.         ::.::.|||.|...|.|.:.....::.....
Yeast   239 -----H---IARESGG----PRDCP---------VAILLLCYAGLTLWYPAILFTYHIFMAGNQQ 282

  Fly   395 TLHEY 399
            |..|:
Yeast   283 TTREF 287

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 39/133 (29%)
ERF2NP_013347.1 COG5273 47..359 CDD:227598 40/135 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C157345810
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.740

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