DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and AT3G56920

DIOPT Version :10

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_191251.2 Gene:AT3G56920 / 824859 AraportID:AT3G56920 Length:338 Species:Arabidopsis thaliana


Alignment Length:222 Identity:55/222 - (24%)
Similarity:92/222 - (41%) Gaps:39/222 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   211 TTPKDELPGIAEASSGEEQAEAQ--TTLQMESVLSLDDDEVGDMDTAERSGLM-HG---QPNICE 269
            |:.:|  |||...:....:||..  ||...|.|.|    ::|.:.......:| :|   :...|:
plant    87 TSSRD--PGIIPRNKQVSEAEIPDVTTQSTEWVTS----KLGSVKLPRTKDVMVNGFTVKVKFCD 145

  Fly   270 ICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSE---IALLLGANLTLT 331
            .|:...|.||:||.:|..||:|.|||..|:..||..|||.:::..|:.|.   |.:.:.:.:::.
plant   146 TCQLYRPPRAFHCSICNNCVQRFDHHCPWVGQCIALRNYPFFVCFLSCSTLLCIYVFVFSWVSML 210

  Fly   332 SICHPFMVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYLWWKGSTL 396
            .:...|.||        |.||.          |..|:..|..:...::..:.....||.....|.
plant   211 KVHGEFYVV--------LADDL----------ILGVLGLYCFVSVWFVGGLTVFHFYLICTNQTT 257

  Fly   397 -----HEYKRTSNAAGRNRIWSNWRAI 418
                 :.|.:..|.. |..|..|::.:
plant   258 CENFRYHYDKKENPY-RKGILENFKEL 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 DHHC 262..399 CDD:396215 36/147 (24%)
AT3G56920NP_191251.2 DHHC 142..263 CDD:396215 35/138 (25%)

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