DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and Zdhhc4

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_082655.1 Gene:Zdhhc4 / 72881 MGIID:1920131 Length:343 Species:Mus musculus


Alignment Length:375 Identity:92/375 - (24%)
Similarity:132/375 - (35%) Gaps:132/375 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly    57 FDLVCTRLVTCRAIDRRNIDGMLIAFQDRLRLPWRGGAK---RISPAAVAPAFIVPLMLGLATLN 118
            |.|:|..|: |           :.....||:....|||:   |:.|..:..| :..|:..|....
Mouse    13 FLLICVVLI-C-----------IFTKSQRLKAVVLGGAQVCSRVIPQCLQRA-VQTLLHQLFHTR 64

  Fly   119 SKTAIVLMLTLVGFTIWGMELAKRTATRTNFFLSWLVFSVFYMIIIFEFQVPLLELAPEENYALM 183
            ..|.|||.|.|     .|:..|:.|.            .||......||.:|.| |.|   |.|:
Mouse    65 HPTFIVLHLLL-----QGLVYAEYTC------------EVFGYCRELEFSLPYL-LLP---YVLL 108

  Fly   184 -----FF--SCAALYCLYSAKALSPLNLVSAQYGTTPKDELPGIAEASSGEEQAEAQTTLQMESV 241
                 ||  :|||          :|        ||..|               |.....||   |
Mouse   109 SVNLVFFTLTCAA----------NP--------GTITK---------------ANESFLLQ---V 137

  Fly   242 LSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGER 306
            ...||             :|..:.:.|..|....|.|:.||.:|..||.|.|||..|:|.|||..
Mouse   138 YKFDD-------------VMFPKNSRCPTCDLRKPARSKHCRLCDRCVHRFDHHCVWVNNCIGAW 189

  Fly   307 NYVWYIVGLALSEIALLLGANLTLTSICHPFMV----VRPLGYPVLLPDDCSEVFEGFD------ 361
            |..::::.|     ..|..:..|:.::...|::    |..| |.....||... |:..|      
Mouse   190 NTRYFLIYL-----LTLTASAATIATVTAAFLLRLVTVSDL-YQETYLDDVGH-FQAVDTVFLIQ 247

  Fly   362 -LGISF--------VVACYALLISSYIAFILARQAYL---------WWKG 393
             |.::|        .|...::|::.|:.|.|    ||         |:||
Mouse   248 HLFLAFPRIVFLLGFVIVLSMLLAGYLCFAL----YLAATNQTTNEWYKG 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 42/160 (26%)
Zdhhc4NP_082655.1 DHHC 151..292 CDD:396215 40/151 (26%)
Di-lysine motif. /evidence=ECO:0000250|UniProtKB:Q9NPG8 340..343
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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