DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment GABPI and Zdhhc2

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_848482.1 Gene:Zdhhc2 / 70546 MGIID:1923452 Length:366 Species:Mus musculus


Alignment Length:323 Identity:71/323 - (21%)
Similarity:117/323 - (36%) Gaps:97/323 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 GGAKRISPAAV--APAFIVPLMLGLATLNSKTAIVLMLTLVGFTIWGMELAKRTATRTNFFLSWL 154
            ||.:|.....:  .|...:.|:||.    |..|..:.|.:|.....|.::....|..       |
Mouse     7 GGVRRRCRRVLYWIPVVFISLLLGW----SYYAYAIQLCIVSMENIGEQVVCLMAYH-------L 60

  Fly   155 VFSVF---YMIIIFEFQVPLLELAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDE 216
            :|::|   |...||     .|.:.|.:.:.|.          |:.|                   
Mouse    61 LFAMFVWSYWKTIF-----TLPMNPSKEFHLS----------YAEK------------------- 91

  Fly   217 LPGIAEASSGEEQAEA-QTTLQMESVLSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRAY 280
                 |....|.:.|| |..|:..:         .|:....|:  |.|....|:.|:.:.|.|.:
Mouse    92 -----ELLEREPRGEAHQEVLRRAA---------KDLPIYTRT--MSGAIRYCDRCQLIKPDRCH 140

  Fly   281 HCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTLTSICHPFMVVRPLGY 345
            ||.||..|:.:.|||..|:|.|:|..||.::::.||.|.:..|             |:....|.|
Mouse   141 HCSVCDKCILKMDHHCPWVNNCVGFSNYKFFLLFLAYSLLYCL-------------FIAATDLQY 192

  Fly   346 PVL-----LPDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYLWW---KGSTLHEYK 400
            .:.     |||..::....|   :.|..|.:::.:||...:      :.|.   ..|||..::
Mouse   193 FIRFWTNGLPDTQAKFHIMF---LFFAAAMFSVSLSSLFGY------HCWLVSKNKSTLEAFR 246

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 38/144 (26%)
Zdhhc2NP_848482.1 DHHC 126..247 CDD:366691 37/143 (26%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 296..366
Mediates localization to plasma membrane and recycling endosomes. /evidence=ECO:0000269|PubMed:21471008 298..366
Non-canonical dileucine endocytic signal. /evidence=ECO:0000269|PubMed:28768144 334..335
NPxY-like endocytic signal. /evidence=ECO:0000269|PubMed:28768144 357..360
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

Return to query results.
Submit another query.