DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and zdhhc23b

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001003757.1 Gene:zdhhc23b / 445301 ZFINID:ZDB-GENE-040808-13 Length:425 Species:Danio rerio


Alignment Length:441 Identity:118/441 - (26%)
Similarity:185/441 - (41%) Gaps:99/441 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LCCCEYVAEDSRERSHILGCCCNCVDFDLVCTRLVTCRAIDRRNIDGMLIAFQDRLRLPWRGGAK 95
            ||||||: :....|||::.|||:|.|.|..|.|.:.....:..::...|....||||:||..||:
Zfish    15 LCCCEYI-DRHGSRSHMVACCCDCEDLDEACDRWMNKEPQNPDSVSRALATINDRLRVPWISGAR 78

  Fly    96 RISPAAVAPAFIVPLMLGLATLNSKTAIVLMLTLVGFTI-WGMELAKRTATRTNFFLSWLVFSVF 159
            :|..:.:.|..::|:.|.:|.|:....|: |||.:..|: |......|...||.|||...:||:|
Zfish    79 QIDVSLIPPLILLPVFLHIAALHYLLGII-MLTAMPITVLWYYFFTHRKKGRTLFFLGLALFSLF 142

  Fly   160 YMIIIFEFQVPLLELAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDELPGIAEAS 224
            ||..:|     |.::.|......:     .|..:.:..||:.:.|:..:.|       ||:..  
Zfish   143 YMFYLF-----LTQVVPRGEVTEL-----QLAVVTAGVALTVIFLMLTKRG-------PGLVR-- 188

  Fly   225 SGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERSGLMH--------------GQP---------- 265
              ...:|..:|:...|.       ..|:|....:|..|              |:|          
Zfish   189 --PRPSETHSTVTYHST-------PPDVDGVYLNGARHQVVIGSRVASSEHTGEPGTEEEEEGVQ 244

  Fly   266 --NICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANL 328
              |.|.:|:.|.||||.||.:||.||.|.|||..|:|.|:|..|:..:::.|....:..:.|.:|
Zfish   245 KRNWCAVCKVVRPRRAGHCRICGVCVLRLDHHCVWINSCVGLANHRTFLLTLLFFLLTSIFGISL 309

  Fly   329 TLTSICHPFMVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLISSYIAFIL---------- 383
            .|.|:|....|:..|.|       |.:|:..:...:.|..|.|:.:::..:..:|          
Zfish   310 VLASVCPDQRVLTALFY-------CPDVYSQYSSALCFTCAWYSSIVTGGLLHLLLLQILNISLN 367

  Fly   384 -------------ARQAYLWWKGSTLH--EYKRTSNAAGRNRIWSNWRAIL 419
                         :.|..||  |..:|  .|.|        ..||||...|
Zfish   368 VTEREARLALREKSAQRRLW--GLIVHTGHYSR--------GFWSNWTEFL 408

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 46/187 (25%)
zdhhc23bNP_001003757.1 7TMR-DISM_7TM <62..179 CDD:284997 39/127 (31%)
zf-DHHC <244..>350 CDD:303066 37/112 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578059
Domainoid 1 1.000 101 1.000 Domainoid score I6890
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H17840
Inparanoid 1 1.050 161 1.000 Inparanoid score I4206
OMA 1 1.010 - - QHG48693
OrthoDB 1 1.010 - - D1261879at2759
OrthoFinder 1 1.000 - - FOG0006883
OrthoInspector 1 1.000 - - otm26025
orthoMCL 1 0.900 - - OOG6_109191
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5590
SonicParanoid 1 1.000 - - X4988
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.700

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