DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and zdhhc16b

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_009304660.1 Gene:zdhhc16b / 393316 ZFINID:ZDB-GENE-040426-1301 Length:382 Species:Danio rerio


Alignment Length:45 Identity:18/45 - (40%)
Similarity:27/45 - (60%) Gaps:0/45 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   267 ICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWY 311
            ||:.|....|.|.:||.:|..|:.:.|||..|||.|:|..|:.::
Zfish   154 ICKKCIVPKPARTHHCSICNRCILKMDHHCPWLNNCVGHFNHRYF 198

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 18/45 (40%)
zdhhc16bXP_009304660.1 zf-DHHC 83..>206 CDD:327686 18/45 (40%)
zf-DHHC 154..310 CDD:307600 18/45 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.810

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