DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and Zdhhc23

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_008766960.1 Gene:Zdhhc23 / 363783 RGDID:1303254 Length:455 Species:Rattus norvegicus


Alignment Length:410 Identity:112/410 - (27%)
Similarity:192/410 - (46%) Gaps:68/410 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EESKSKENGSLCCCEYVAEDSRERSHILGCCCNCVDFDLVCTRLVTCRAIDRRNIDGMLIAFQDR 85
            ::::..|...||||||: :.:.|::|:..|.|:|.|.|..|.|.:||:::.....:.:.....||
  Rat     7 KKTEEPELEPLCCCEYI-DRNGEKNHVAACLCDCQDLDEGCDRWLTCKSLRPETCERITDTISDR 70

  Fly    86 LRLPWRGGAKRISPAAVAPAFIVPLMLGLATLNSKTAIVLMLTLVGFTIWGMELAKRTATRTNFF 150
            ||:||..|||:::.:.:.|..::|::|.:|:.:....:|::.:|....:|...|..|...:|.||
  Rat    71 LRIPWLRGAKKVNISILPPLVLLPVLLRVASWHFLLGVVVLTSLPMLALWYYYLTHRRKEQTLFF 135

  Fly   151 LSWLVFSVFYMIIIFEFQVPLLELAPEENYA---LMFFSCA---ALYCLYSAKALSPLNLVSAQY 209
            ||..:||:.||..:|     |.|:.|:.:..   |...:|.   .|..||.||.       :..|
  Rat   136 LSLGLFSLGYMYYVF-----LQEVVPQGHVGPAQLALLTCGLFLILVALYRAKK-------NPGY 188

  Fly   210 GTTP--KDELPGIAE----ASSGEEQAEAQTTLQMESVL---SLDDDEVGDMDTAERSGL---MH 262
            .:.|  .|:.|..::    ...|:|:.:..........|   :|.||..|    :.|.||   ..
  Rat   189 LSNPACNDKSPSNSQIECPIKKGQEKTKGFPGTDTSGSLNNRTLKDDAKG----SSRVGLDSPAK 249

  Fly   263 GQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNC-------------------------- 301
            .:.:.|..|:.|.|.||:||.:||.||:|.|||..||.|                          
  Rat   250 SKEDWCAKCQLVRPARAWHCRICGICVRRMDHHCVWLACVSCELQETFSNKCICPPPPAVLRINS 314

  Fly   302 CIGERNYVWYIVGLALSEIALLLGANLTLTSICHPFMVVRPLGYPVLLPDDCSEVFEGFDLGISF 366
            |:||.|:..:|:.|::..:..:.|.:|||.:||....:...|.|       |..|:..:...:||
  Rat   315 CVGESNHQAFILALSIFLLTSVYGISLTLNTICRDRSLFTALFY-------CPGVYANYSSALSF 372

  Fly   367 VVACYALLISSYIAFILARQ 386
            ....|:::|::.:|:|...|
  Rat   373 TCVWYSVIITAGMAYIFLIQ 392

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 42/151 (28%)
Zdhhc23XP_008766960.1 DHHC 252..404 CDD:396215 42/148 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338549
Domainoid 1 1.000 102 1.000 Domainoid score I6741
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H17840
Inparanoid 1 1.050 176 1.000 Inparanoid score I3950
OMA 1 1.010 - - QHG48693
OrthoDB 1 1.010 - - D1261879at2759
OrthoFinder 1 1.000 - - FOG0006883
OrthoInspector 1 1.000 - - oto98632
orthoMCL 1 0.900 - - OOG6_109191
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4988
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
1312.810

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