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Protein Alignment GABPI and Zdhhc6
DIOPT Version :9
Sequence 1: | NP_608741.1 |
Gene: | GABPI / 33516 |
FlyBaseID: | FBgn0031495 |
Length: | 420 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_001032741.1 |
Gene: | Zdhhc6 / 361771 |
RGDID: | 1304657 |
Length: | 413 |
Species: | Rattus norvegicus |
Alignment Length: | 123 |
Identity: | 30/123 - (24%) |
Similarity: | 48/123 - (39%) |
Gaps: | 45/123 - (36%) |
- Green bases have known domain annotations that are detailed below.
Fly 268 CEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTLTS 332
|::|:.....|::||..|..||.:.|||..|:|.|.|.:|: |:.||
Rat 101 CKVCQAYKAPRSHHCRKCNRCVMKMDHHCPWINNCCGHQNH-----------------ASFTL-- 146
Fly 333 ICHPFMVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYLW 390
|:::.||| |:.. ...||:..|..|.: |.::.|
Rat 147 ----FLLLAPLG--------CTHA------AFIFVMTMYTQLYN--------RLSFGW 178
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
GABPI | NP_608741.1 |
zf-DHHC |
262..399 |
CDD:279823 |
30/123 (24%) |
Zdhhc6 | NP_001032741.1 |
DHHC |
95..241 |
CDD:396215 |
30/123 (24%) |
SH3_2 |
317..394 |
CDD:400139 |
|
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5273 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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