DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and Zdhhc23

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001007461.1 Gene:Zdhhc23 / 332175 MGIID:2685625 Length:425 Species:Mus musculus


Alignment Length:378 Identity:112/378 - (29%)
Similarity:190/378 - (50%) Gaps:34/378 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 EESKSKENGSLCCCEYVAEDSRERSHILGCCCNCVDFDLVCTRLVTCRAIDRRNIDGMLIAFQDR 85
            ::::..|...||||||: :.:.|::|:..|.|:|.|.|..|.|.:||:::.....:.:.....||
Mouse     7 KKTEEPELEPLCCCEYI-DRNGEKNHVAACLCDCQDLDEGCDRWLTCQSLRPETCERITDTISDR 70

  Fly    86 LRLPWRGGAKRISPAAVAPAFIVPLMLGLATLNSKTAIVLMLTLVGFTIWGMELAKRTATRTNFF 150
            ||:||..|||:::.:.|.|..::|:.|.:|:.:....:|::.:|....:|...|..|...:|.||
Mouse    71 LRIPWLRGAKKVNISIVPPLVLLPVFLHVASWHFLLGVVVLTSLPMLALWYYYLTHRRKEQTLFF 135

  Fly   151 LSWLVFSVFYMIIIFEFQVPLLELAPEENYA---LMFFSCA---ALYCLYSAKALSPLNLVSAQY 209
            ||..:||:.||..:|     |.|:.|:....   |...:|.   .|..||.||. :|..|.:.:.
Mouse   136 LSLGLFSLGYMYYVF-----LREVVPQGRVGPTQLALLTCGLLLILLALYRAKK-NPGYLSNDKS 194

  Fly   210 GTTPKDELPGIAEASSGEEQAEAQTTLQMESVL---SLDDDEVGDMDTAERSGL---MHGQPNIC 268
            .:..:.|.|    ...|:|:.:..........|   :|.||..|    :.|.||   ...:.:.|
Mouse   195 PSNSQIECP----VKKGQEKTKGFPGTDASGSLNNRTLKDDVRG----SSRVGLDSPAKVKEDWC 251

  Fly   269 EICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTLTSI 333
            ..|:.|.|.||:||.:||.||:|.|||..|:|.|:||.|:..:|:.|::..:..:.|.:|||.:|
Mouse   252 AKCQLVRPARAWHCRICGICVRRMDHHCVWINSCVGESNHQAFILALSIFLLTSVYGISLTLNTI 316

  Fly   334 CHPFMVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQ 386
            |....:...|.|       |..|:..:...:||....|:::|::.:|:|...|
Mouse   317 CRDRSLFTALFY-------CPGVYANYSSALSFTCVWYSVIITAGMAYIFLIQ 362

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 41/125 (33%)
Zdhhc23NP_001007461.1 DHHC 248..374 CDD:396215 41/122 (34%)
Interaction with NOS1. /evidence=ECO:0000250 422..425
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167834959
Domainoid 1 1.000 102 1.000 Domainoid score I6836
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H17840
Inparanoid 1 1.050 177 1.000 Inparanoid score I4024
Isobase 1 0.950 - 0 Normalized mean entropy S4031
OMA 1 1.010 - - QHG48693
OrthoDB 1 1.010 - - D519878at33208
OrthoFinder 1 1.000 - - FOG0006883
OrthoInspector 1 1.000 - - oto95140
orthoMCL 1 0.900 - - OOG6_109191
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5590
SonicParanoid 1 1.000 - - X4988
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1615.650

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