DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and Zdhhc20

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_006252134.1 Gene:Zdhhc20 / 305923 RGDID:1305755 Length:444 Species:Rattus norvegicus


Alignment Length:335 Identity:65/335 - (19%)
Similarity:121/335 - (36%) Gaps:103/335 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   124 VLMLTLVGFTIWG-----MELAKRTATRTN------FFLSWLVFSVFYMIIIFEFQVPLLELAPE 177
            ||.:|.|  .:|.     :||...|.:||.      .:|  :.|.:|:::.::.:.:.:.     
  Rat    78 VLFITFV--VVWSYYAYVVELCVSTVSRTGEKGKTVVYL--VAFHLFFVMFVWSYWMTIF----- 133

  Fly   178 ENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDELPGIAEASSGEEQAEAQTTLQ-MESV 241
                                             |:|.........::|.:|:.|.:.:.: .:.:
  Rat   134 ---------------------------------TSPASPSKEFYLSNSEKERYEKEFSQERQQDI 165

  Fly   242 LSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGER 306
            |.....::....|:....:.:     ||.|:.:.|.||:||..|..||.:.|||..|:|.|:|..
  Rat   166 LRRAARDLPVYTTSASKAIRY-----CEKCQLIKPDRAHHCSACDRCVLKMDHHCPWVNNCVGFT 225

  Fly   307 NYVWYIVGLALSEIALLLGANLTLTSICHPFMVVR-------PLGYPVLL-------PDDCSEVF 357
            ||.::::.|..|.:..|..|...|......:.:.|       |...|.:|       |.....| 
  Rat   226 NYKFFMLFLLYSLLYCLFVAATVLEYFIKFWTLCRRKSTENCPKNEPTVLTFPSAKFPSAKFHV- 289

  Fly   358 EGFDLGISFVVACYALLISSYIAFILARQAYLWWKGSTLHEYKRTSNAAGRNRIWS--------- 413
                |.:.||.|.:.:.:.|..::      :.|..|.     .||:..:.|..::|         
  Rat   290 ----LFLFFVSAMFFVSVLSLFSY------HCWLVGK-----NRTTIESFRAPMFSYGIDGNGFS 339

  Fly   414 -----NWRAI 418
                 |||.:
  Rat   340 LGCSKNWRQV 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 38/150 (25%)
Zdhhc20XP_006252134.1 zf-DHHC 75..380 CDD:303066 65/335 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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