DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and Zdhhc25

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001034422.1 Gene:Zdhhc25 / 300323 RGDID:1598341 Length:279 Species:Rattus norvegicus


Alignment Length:258 Identity:59/258 - (22%)
Similarity:90/258 - (34%) Gaps:78/258 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 LAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDELPGIAEASSGEEQAEAQTTLQM 238
            |.|..|...:..:....:.|.|...:|.|..:....|:.|....||                   
  Rat    59 LIPSNNMLYIVANGMIFHLLASLALVSHLRTMLTDPGSVPLGNRPG------------------- 104

  Fly   239 ESVLSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCI 303
                         .||.          :.|..||...|:||.||.||..|:::.|||..|:|.|:
  Rat   105 -------------PDTV----------SYCPDCRSAIPKRAAHCAVCKRCIRKNDHHCPWVNNCV 146

  Fly   304 GERNYVWYI-----VGLALSEIALLLGANLTLTSICHPFMVVRPLGYPVLLP------DDCSEVF 357
            ||.|..:::     :||:.:.:.||                   ||.|||..      |..|.|.
  Rat   147 GEDNQKYFLLFIMYIGLSGTHVLLL-------------------LGIPVLCSYARGEWDSSSSVS 192

  Fly   358 EGFDLGISFVVACYALLISSYIAFILARQAYLWWKGSTLHE--YKRTSNAAGRNRIWSNWRAI 418
            ....:....:||....::||   .:|..|....:...|..|  |:.|.:...|.:. :|.:||
  Rat   193 PPAPILFLLLVALMGFVLSS---VMLCTQMCTIYTDKTTTELLYQNTHSPGNRAKC-ANLKAI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 40/149 (27%)
Zdhhc25NP_001034422.1 zf-DHHC 109..230 CDD:279823 39/142 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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