DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and Zdhhc25

DIOPT Version :10

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001034422.1 Gene:Zdhhc25 / 300323 RGDID:1598341 Length:279 Species:Rattus norvegicus


Alignment Length:258 Identity:59/258 - (22%)
Similarity:90/258 - (34%) Gaps:78/258 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   174 LAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDELPGIAEASSGEEQAEAQTTLQM 238
            |.|..|...:..:....:.|.|...:|.|..:....|:.|....||                   
  Rat    59 LIPSNNMLYIVANGMIFHLLASLALVSHLRTMLTDPGSVPLGNRPG------------------- 104

  Fly   239 ESVLSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCI 303
                         .||.          :.|..||...|:||.||.||..|:::.|||..|:|.|:
  Rat   105 -------------PDTV----------SYCPDCRSAIPKRAAHCAVCKRCIRKNDHHCPWVNNCV 146

  Fly   304 GERNYVWYI-----VGLALSEIALLLGANLTLTSICHPFMVVRPLGYPVLLP------DDCSEVF 357
            ||.|..:::     :||:.:.:.||                   ||.|||..      |..|.|.
  Rat   147 GEDNQKYFLLFIMYIGLSGTHVLLL-------------------LGIPVLCSYARGEWDSSSSVS 192

  Fly   358 EGFDLGISFVVACYALLISSYIAFILARQAYLWWKGSTLHE--YKRTSNAAGRNRIWSNWRAI 418
            ....:....:||....::||   .:|..|....:...|..|  |:.|.:...|.:. :|.:||
  Rat   193 PPAPILFLLLVALMGFVLSS---VMLCTQMCTIYTDKTTTELLYQNTHSPGNRAKC-ANLKAI 251

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 DHHC 262..399 CDD:396215 40/149 (27%)
Zdhhc25NP_001034422.1 DHHC 110..230 CDD:396215 39/141 (28%)

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