DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and Zdhhc8

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001365948.1 Gene:Zdhhc8 / 27801 MGIID:1338012 Length:775 Species:Mus musculus


Alignment Length:309 Identity:66/309 - (21%)
Similarity:100/309 - (32%) Gaps:93/309 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    91 RGGAKRISPAAVAP-AFIVPLMLGLATLNSKTAIVLMLTLVGFTIWGMELAKRTATRTNFFLSWL 154
            |....|:.||...| |....|::|.:||              |.:              |...||
Mouse     3 RSPGTRLKPAKYIPVATAAALLVGSSTL--------------FFV--------------FTCPWL 39

  Fly   155 VFSVFYMIIIFEFQVPLLELAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDELPG 219
            ..:|...|.::...:.|..||   |:::..|..                              ||
Mouse    40 TRAVSPAIPVYNGILFLFVLA---NFSMATFMD------------------------------PG 71

  Fly   220 IAEASSGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRAYHCPV 284
            :...:..:|..|             ||.........:..|: ..:...|..|....|.|..||.|
Mouse    72 VFPRADEDEDKE-------------DDFRAPLYKNVDVRGI-QVRMKWCATCHFYRPPRCSHCSV 122

  Fly   285 CGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTLTSICHPFMVVRPLGYPVLL 349
            |..||:..|||..|:|.|||.|||.::.:.|      |.|.|::           |..:.:.:|.
Mouse   123 CDNCVEDFDHHCPWVNNCIGRRNYRYFFLFL------LSLSAHM-----------VGVVAFGLLY 170

  Fly   350 PDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYLWWKGSTLHE 398
            ..:.||........|:..|.|.|.|....:..:......|..:|.|.:|
Mouse   171 VLNHSEGLGAAHTTITMAVMCVAGLFFIPVIGLTGFHVVLVTRGRTTNE 219

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 38/137 (28%)
Zdhhc8NP_001365948.1 DHHC 99..224 CDD:396215 38/139 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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