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Protein Alignment GABPI and dhhc-11
DIOPT Version :9
Sequence 1: | NP_608741.1 |
Gene: | GABPI / 33516 |
FlyBaseID: | FBgn0031495 |
Length: | 420 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_491675.3 |
Gene: | dhhc-11 / 188748 |
WormBaseID: | WBGene00020694 |
Length: | 316 |
Species: | Caenorhabditis elegans |
Alignment Length: | 161 |
Identity: | 46/161 - (28%) |
Similarity: | 65/161 - (40%) |
Gaps: | 37/161 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 266 NICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTL 330
:.|.||...|.|...||..|..|:...|||..|||.|||.:||..::| |::..|: .
Worm 96 SFCSICEVRTYRETKHCKRCNFCIDDFDHHCVWLNNCIGGKNYRPFVV--------LVICVNV-F 151
Fly 331 TSICHPFMVV-----------RPLGYPVLLPDDCSEVFEGFDLGISFVVAC-YALLISSYIAFIL 383
:..|....|| |.| :.|..| :.| |.||:|..| ..::|...::...
Worm 152 SMFCFGLSVVIFFSWITNSDERAL---IKLVQD-----KDF-LKISWVFLCVICIIIYGVLSVTT 207
Fly 384 ARQAYLWWK----GSTLHEY---KRTSNAAG 407
|...|..:| |.|.:.| :|.|...|
Worm 208 AHLLYFHFKLFKVGQTTYRYMTNQRRSAKVG 238
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
GABPI | NP_608741.1 |
zf-DHHC |
262..399 |
CDD:279823 |
42/148 (28%) |
dhhc-11 | NP_491675.3 |
DUF485 |
14..75 |
CDD:294756 |
|
zf-DHHC |
91..231 |
CDD:279823 |
43/152 (28%) |
Blue background indicates that the domain is not in
the aligned region.
|
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5273 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
0 | 0.000 |
Not matched by this tool. |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
|
2 | 1.810 |
|
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