DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and dhhc-11

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_491675.3 Gene:dhhc-11 / 188748 WormBaseID:WBGene00020694 Length:316 Species:Caenorhabditis elegans


Alignment Length:161 Identity:46/161 - (28%)
Similarity:65/161 - (40%) Gaps:37/161 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   266 NICEICRKVTPRRAYHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTL 330
            :.|.||...|.|...||..|..|:...|||..|||.|||.:||..::|        |::..|: .
 Worm    96 SFCSICEVRTYRETKHCKRCNFCIDDFDHHCVWLNNCIGGKNYRPFVV--------LVICVNV-F 151

  Fly   331 TSICHPFMVV-----------RPLGYPVLLPDDCSEVFEGFDLGISFVVAC-YALLISSYIAFIL 383
            :..|....||           |.|   :.|..|     :.| |.||:|..| ..::|...::...
 Worm   152 SMFCFGLSVVIFFSWITNSDERAL---IKLVQD-----KDF-LKISWVFLCVICIIIYGVLSVTT 207

  Fly   384 ARQAYLWWK----GSTLHEY---KRTSNAAG 407
            |...|..:|    |.|.:.|   :|.|...|
 Worm   208 AHLLYFHFKLFKVGQTTYRYMTNQRRSAKVG 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 42/148 (28%)
dhhc-11NP_491675.3 DUF485 14..75 CDD:294756
zf-DHHC 91..231 CDD:279823 43/152 (28%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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