DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and Zdhhc7

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_596885.1 Gene:Zdhhc7 / 170906 RGDID:620205 Length:308 Species:Rattus norvegicus


Alignment Length:281 Identity:63/281 - (22%)
Similarity:115/281 - (40%) Gaps:72/281 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 LSWLVFSVFYMIIIFEFQVPLLELAPEEN--YAL---MFFSCAALYCLYSAKALSPLNLVSAQYG 210
            ::||      :::..:|.|..:.|.|.::  |::   :.|:|.|:..|     .|.|..:....|
  Rat    53 MTWL------LVVYADFVVTFVMLLPSKDFWYSVVNGVLFNCLAVLAL-----SSHLRTMLTDPG 106

  Fly   211 TTPKDELPGIAEASSGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERSGLMHGQPNICEICRKVT 275
            ..||           |....|...:||::.         |:        :::..|..|  |  :.
  Rat   107 AVPK-----------GNATKEYMESLQLKP---------GE--------VIYKCPKCC--C--IK 139

  Fly   276 PRRAYHCPVCGTCVKRRDHHSYWLNCCIGERN---YVWYIVGLALSEIALLLGANLTLTSICHPF 337
            |.||:||.:|..|:::.|||..|:|.|:||:|   :|.:.:.:|||.|..|:...|...| |   
  Rat   140 PERAHHCSICKRCIRKMDHHCPWVNNCVGEKNQRFFVLFTMYIALSSIHALILCGLQFIS-C--- 200

  Fly   338 MVVRPLGYPVLLPDDCSEVFEGFDLGISFVVACY----ALLISSYIAFILARQAYLWWKGSTLHE 398
              ||...      .:||:    |...|:.::..:    .||..::.|.:...|.:......|..|
  Rat   201 --VRGQW------TECSD----FSPPITVILLVFLCLEGLLFFTFTAVMFGTQIHSICNDETEIE 253

  Fly   399 YKRTSNAAGRNRI-WSNWRAI 418
            ..::.......|: |...:::
  Rat   254 RLKSEKPTWERRLRWEGMKSV 274

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 39/143 (27%)
Zdhhc7NP_596885.1 DHHC 131..258 CDD:396215 40/146 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.810

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