DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and zdhhc23a

DIOPT Version :9

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:XP_021327278.1 Gene:zdhhc23a / 100150190 ZFINID:ZDB-GENE-060526-38 Length:434 Species:Danio rerio


Alignment Length:399 Identity:102/399 - (25%)
Similarity:174/399 - (43%) Gaps:74/399 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LCCCEYVAEDSRERSHILGCCCNCVDFDLVCTRLVTCRAIDRRNIDGMLIA-FQDRLRLP-WRGG 93
            ||||   .:..::|.:   |||:|.:.|..|.||:.... |:.::....|: ..|||.:. ...|
Zfish    15 LCCC---GDIDQQREY---CCCDCEELDDACERLLRGEP-DKPDVFSRFISRMADRLGVSCCTVG 72

  Fly    94 AKRISPAAVAPAFIVPLMLGLATLNSKTAIVLMLTLVGFTIWGMELAKRTATRTNFFLSWLVFSV 158
            ..|:..:.:.|..::|.:|.:|.:|....::::..|....:|...:..|...||.||||..:||:
Zfish    73 PLRLELSVLPPMVLIPGLLRVAAINCLLGVIILTALPLLVLWYYYMTHRRKRRTLFFLSLALFSL 137

  Fly   159 FYMIIIFEFQVPLLELAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPKDELPGIAEA 223
            .||..:|     |.|:.|..:...:....|.     :...|:.::||..:.|       ||..::
Zfish   138 AYMYYLF-----LTEIVPRGDVTHLQVVTAT-----TGMMLTLISLVRTKQG-------PGFVKS 185

  Fly   224 SSGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERSGLMH--GQPNI---CEICRKVTPRRAYHCP 283
            .|        ..|.:.|.|:.:......:||..|:|:.|  |:.::   |.:|:.|.|.||.||.
Zfish   186 QS--------LALGINSSLATNRSTNLTLDTDLRNGVSHLKGEKDVKKKCPVCQLVRPPRAGHCR 242

  Fly   284 VCGTCVKRRDHHSYWLNCCIGERNYVWYIVGLALSEIALLLGANLTLTSICHPFMVVRPLGYPVL 348
            :||.||.|.|||..|:|.|:|:.|:..:|:.|.|..:....|.:|.|.|||....:...:.|   
Zfish   243 ICGACVLRMDHHCVWINSCVGQANHRQFILTLLLFLLTSFYGISLVLRSICPKQSLFTAMLY--- 304

  Fly   349 LPDDCSEVFEGFDLGISFVVACYALLISSYIAFILARQAYLWWKGSTLHEY------------KR 401
                |..|:..:...:.|....|:::|:                |..||.:            :|
Zfish   305 ----CPGVYNQYSTALCFTCVWYSVIIT----------------GGLLHLFILQIINVSCNVTER 349

  Fly   402 TSNAAGRNR 410
            .:..|.||:
Zfish   350 EAQIALRNK 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 zf-DHHC 262..399 CDD:279823 41/141 (29%)
zdhhc23aXP_021327278.1 zf-DHHC 224..352 CDD:307600 40/150 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578060
Domainoid 1 1.000 101 1.000 Domainoid score I6890
eggNOG 1 0.900 - - E1_COG5273
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 161 1.000 Inparanoid score I4206
OMA 1 1.010 - - QHG48693
OrthoDB 1 1.010 - - D1261879at2759
OrthoFinder 1 1.000 - - FOG0006883
OrthoInspector 1 1.000 - - otm26025
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5590
SonicParanoid 1 1.000 - - X4988
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1312.800

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