DRSC/TRiP Functional Genomics Resources

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Protein Alignment GABPI and zdhhc21

DIOPT Version :10

Sequence 1:NP_608741.1 Gene:GABPI / 33516 FlyBaseID:FBgn0031495 Length:420 Species:Drosophila melanogaster
Sequence 2:NP_001116527.2 Gene:zdhhc21 / 100144560 ZFINID:ZDB-GENE-080401-2 Length:263 Species:Danio rerio


Alignment Length:180 Identity:52/180 - (28%)
Similarity:75/180 - (41%) Gaps:45/180 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   151 LSWLVFS-VFYMIIIFEFQVPLLELAPEENYALMFFSCAALYCLYSAKALSPLNLVSAQYGTTPK 214
            :.|...| ||::.|...|.:|.|.|.|  :||....:...:.|.|    |:.|...||.:..:..
Zfish    12 MGWFCMSMVFFVWIYNSFLIPKLVLLP--HYAEGHITAEPVICYY----LASLLCFSALFRASTT 70

  Fly   215 DELPGIAEASSGEEQAEAQTTLQMESVLSLDDDEVGDMDTAERSGLMHGQPNICEICRKVTPRRA 279
            |  ||               .|..:..:.|          |||...     .:|..|..:.|:|:
Zfish    71 D--PG---------------KLAQDPKIPL----------AERDNW-----ELCNKCNMMRPKRS 103

  Fly   280 YHCPVCGTCVKRRDHHSYWLNCCIGERNYVWYIVGL-----ALSEIALLL 324
            :||..||.||:|.|||..|:|.|:||.|: |..:.|     .||...|:|
Zfish   104 HHCSRCGHCVRRMDHHCPWINNCVGEDNH-WLFLQLCFYTQVLSFYTLVL 152

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GABPINP_608741.1 DHHC 262..399 CDD:396215 26/68 (38%)
zdhhc21NP_001116527.2 None

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