DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sf3b2 and sap145

DIOPT Version :9

Sequence 1:NP_001259979.1 Gene:Sf3b2 / 33514 FlyBaseID:FBgn0031493 Length:749 Species:Drosophila melanogaster
Sequence 2:NP_594733.1 Gene:sap145 / 2541609 PomBaseID:SPAC22F8.10c Length:601 Species:Schizosaccharomyces pombe


Alignment Length:642 Identity:254/642 - (39%)
Similarity:348/642 - (54%) Gaps:114/642 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   129 ERNKKKKKRKKQNRKIRHQIEFARQQQLAQAEENEPEAKDSETKAHGSEDEQVAEKEKKDKRKES 193
            |||.|:|.:|.:|:..|.:.:..|::..:.|                    ::|||...||    
pombe    35 ERNNKQKNKKSRNQVRREKKKLLREKTNSGA--------------------KLAEKNSDDK---- 75

  Fly   194 RSKRRKDRSDEKDTDKKA-GEANDENVTIEYVPEKI--TIADLA------PMYRQFYRVFEIFKL 249
              .:..:.:|....|||: |...|.|.| :.|...:  ||.|..      |:..||..||..||.
pombe    76 --DQLTENNDNLYNDKKSNGNFYDTNKT-DSVDGMVYTTIVDSVELDPNDPLIEQFKDVFNRFKA 137

  Fly   250 ENKPKPVEKDKSSHDSESHPRDKKATDK-QLEDEDD----DGDDDEERKEDKEKLSKRKLKKLTR 309
            :.:.|                |.:.||| |:...||    :|::|..:|:.:|||||:||:||.|
pombe   138 DGQEK----------------DFEDTDKGQIMYSDDEILSEGEEDALQKQQEEKLSKKKLRKLKR 186

  Fly   310 LSVAELKQLVSRPDVVEMHDVTARDPKLLVQLKAYRNTVQVPRHWCFKRKYLQGKRGIEKPPFDL 374
            ::||:||.|..:.||||..||::.||..|..||||.|||.|||||..||.||.|:||||:..|:|
pombe   187 MTVAQLKMLSEKADVVEWWDVSSLDPLFLTHLKAYPNTVPVPRHWNQKRDYLSGQRGIERQLFEL 251

  Fly   375 PAFIKKTGIMEMRESLQEREDAKTLKAKMRERVRPKMGKIDIDYQKLHDAFFKWQTKPRMTIHGD 439
            |::|:.|||::||.::.|.|....|:.||||||:|||||:||||||||||||::||||.:|..|:
pombe   252 PSYIRATGIVQMRNAVHENEADMPLRQKMRERVQPKMGKLDIDYQKLHDAFFRYQTKPVLTGFGE 316

  Fly   440 LYYEGKEFETRLKEKKPGDLSEELRIALGMPVGPNSHKIPPPWLIAQQRYGPPPSYPNLKIPGLN 504
            .|:||||.|..:|||:|||:|||||.|||:..|     .|||||.|.||||||||||:|||||:|
pombe   317 CYFEGKELEADVKEKRPGDISEELREALGIAPG-----APPPWLFAMQRYGPPPSYPDLKIPGVN 376

  Fly   505 APIPDGTSFGYHAGGWGKPPVDENGKPLYGDVFGTNILDLDNGVDEADIERNQWGELES-ESEES 568
            .|||.|..:|:|.|||||||||:..:|||||||| |:....:....:.:....|||||. |.|||
pombe   377 CPIPTGAQWGFHPGGWGKPPVDQFNRPLYGDVFG-NVKPRIHAGTGSPVSTQHWGELEEFEEEES 440

  Fly   569 SEEEE-EDGEDLGDQQDETGLVTPVEGLVTPSG---------LTSVPAGMETPENIELRKKKIEA 623
            ||||| ||.|...::..|...:...:....|..         ||.........:|:||||....:
pombe   441 SEEEESEDVEYPTEEITERETIEEYQSASEPRSQREDLHAEPLTYFNQSNVEVDNVELRKNTQPS 505

  Fly   624 EMEDNETPVLYQVLPEKRTDRIGASMMGSTHVYDVSGSGANKQPPVRS-----TTDREGIVELAL 683
            ....|..  ||||||||.|:..|  .||..|.||:. :..:..|..|:     ::..:|.|.|  
pombe   506 SDAANRD--LYQVLPEKSTNISG--FMGPQHQYDIP-TAEDTLPQKRNAHSMLSSTNKGDVAL-- 563

  Fly   684 DPSELDLDNDAMAQRYEQQMREQQNHLQKEDLSDMLAEH------VARQKSKRKRQQ 734
                                  .|:...:::||::::|.      ..|||::.||.:
pombe   564 ----------------------NQSSNWQDELSELVSEQAMKVGAAKRQKTQSKRDK 598

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sf3b2NP_001259979.1 CUS1 166..536 CDD:227509 183/383 (48%)
DUF382 320..446 CDD:281964 74/125 (59%)
PSP 451..508 CDD:128850 38/56 (68%)
sap145NP_594733.1 CUS1 17..518 CDD:227509 229/533 (43%)
BAR <18..>100 CDD:299863 21/90 (23%)
DUF382 198..323 CDD:281964 74/124 (60%)
PSP 328..381 CDD:128850 39/57 (68%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 161 1.000 Domainoid score I975
eggNOG 1 0.900 - - E1_COG5182
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 386 1.000 Inparanoid score I409
OMA 1 1.010 - - QHG54831
OrthoFinder 1 1.000 - - FOG0003115
OrthoInspector 1 1.000 - - oto101307
orthoMCL 1 0.900 - - OOG6_102282
Panther 1 1.100 - - LDO PTHR12785
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1279
SonicParanoid 1 1.000 - - X2980
TreeFam 1 0.960 - -
1312.860

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