Protein Alignment Prp40 and PRP40C

DIOPT Version :10

• Sequence 1: NP_608738.1
• Gene: Prp40 / 33513
• FlyBaseID: FBgn0031492
• Length: 806
• Species: Drosophila melanogaster
• Sequence 2: NP_188618.3
• Gene: PRP40C / 821521
• AraportID: AT3G19840
• Length: 835
• Species: Arabidopsis thaliana
• Alignment Length: 708
• Identity: 168/708 - (23%)
• Similarity: 286/708 - (40%)
• Gaps: 169/708 - (23%)

  Fly     4 PPSVGNGGAPPGRGIGY--TPPGA-------IVPQFPPPG---FGAPP-------------PPEL 43
            |||:  ||.|....:.:  |.||:       |.|..|..|   .||.|             .|::
plant   159 PPSM--GGIPRAPFLSHPTTFPGSYPFPVRGISPNLPYSGSHPLGASPMGSVGNVHALPGRQPDI 221

  Fly    44 AAAFGVMATSTE--------------------WTEHKAPDGRPYYYNQNTKQSSWEKPEAL---- 84
            :.     ...||                    ||.||:..|..||||..|.||::|||...
plant   222 SP-----GRKTEELSGIDDRAGSQLVGNRLDAWTAHKSEAGVLYYYNSVTGQSTYEKPPGFGGEP 281

  Fly    85 ----MTPAELLHNQCP---WKEYRSDTGKVYYHNVATKETCWEPPPEYVDM--KAKAKAEEAAAA 140
                :.|..:.....|   |....::.||.||:|..||.:.|:.|.|..|.  |.:.:|.|:.|:
plant   282 DKVPVQPIPVSMESLPGTDWALVSTNDGKKYYYNNKTKVSSWQIPAEVKDFGKKLEERAMESVAS 346

  Fly   141 AKAVAAMT--SSSLAGMVPPA-------------------AL----ASILPAALPVAPRLPTPEI 180
            ..: |.:|  .|.|..:..||                   ||    ..:..:.:||:..: |.|.
plant   347 VPS-ADLTEKGSDLTSLSAPAISNGGRDAASLKTTNFGSSALDLVKKKLHDSGMPVSSTI-TSEA 409

  Fly   181 HS----PLTPSSNE-NSSSAMDQAMAATLAAIEVPQQNAKKDDKSESAVVFKDKREAIESFKELL 240
            :|    .:|||... ||:..:..|..|  .|:.....:::.:|...|      |.|..:.|||:|
plant   410 NSGKTTEVTPSGESGNSTGKVKDAPGA--GALSDSSSDSEDEDSGPS------KEECSKQFKEML 466

  Fly   241 RDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNAYKTQKIKDEREESRLKAKKAKEDLEQ 305
            ::|.:...:.|::.:..|..|||:.|..:.:.|:..|..|...:.::||.|.|...|.|.|...|
plant   467 KERGIAPFSKWEKELPKIIFDPRFKAIPSHSVRRSLFEQYVKTRAEEERREKRAAHKAAIEGFRQ 531

  Fly   306 FL-MSSDKMNSQMKYFRCEEVFAGTRTWTAVPEPDRRDIYEDCIFNL---AKREKEEARLLKKRN 366
            .| .:|..::....|...::.:.....:.|:...:|..:..:.:.:|   |:::.:|.|.....:
plant   532 LLDDASTDIDQHTDYRAFKKKWGNDLRFEAIERKEREGLLNERVLSLKRSAEQKAQEIRAAAASD 596

  Fly   367 MKVLGELLESMTSINHATTWSEAQVMLLDNVAFKNDVTLLGMDKEDALIVFEEHIRTLE------ 425
            .|.:  |.|...|||  :.||:.:..|      :|:.....:..||..:.:.|:|..|:
plant   597 FKTM--LREREISIN--SHWSKVKDSL------RNEPRYRSVAHEDREVFYYEYIAELKAAQRGD 651

  Fly   426 -------KEEDEEREREKKRMKRQQRKNRD---------------SFLALLDSLHEEGKLTSMSL 468
                   .|||:.||||::..||::|:.::               |:.|||.....:.:.:
plant   652 DHEMKARDEEDKLRERERELRKRKEREVQEVERVRQKIRRKEASSSYQALLVEKIRDPEAS---- 712

  Fly   469 WVELYPIISADLRFSAMLGQSGSTPLD---LFKFYVENLKAR-FHDEKKIIREILKEKAFVVQ-- 527
            |.|..||:..|.:..|  ......|.|   ||:.:|::|..| .||.|.::.|.|..:|..:|
plant   713 WTESKPILERDPQKRA--SNPDLEPADKEKLFRDHVKSLYERCVHDFKALLAEALSSEAATLQTE 775

  Fly   528 -AKTSFEDFATVVCEDKRSASLDAGNVKLTYNSLLEKAEAIEKERMKEEVRRLRKLEN 584
             .||:...::|.    |:....|     :.|:.:..:...:...|..|::.|.::.||
plant   776 DGKTALNSWSTA----KQVLKPD-----IRYSKMPRQDREVVWRRYVEDISRKQRHEN 824

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Prp40	NP_608738.1	PRP40	54..634	CDD:227435	151/633 (24%)
PRP40C	NP_188618.3	PHA03247	<24..230	CDD:223021	19/77 (25%)
		PRP40	249..>625	CDD:227435	99/395 (25%)
		FF	693..745	CDD:426471	14/57 (25%)