Sequence 1: | NP_608738.1 | Gene: | CG3542 / 33513 | FlyBaseID: | FBgn0031492 | Length: | 806 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006257426.1 | Gene: | Prpf40b / 363000 | RGDID: | 1565411 | Length: | 934 | Species: | Rattus norvegicus |
Alignment Length: | 899 | Identity: | 362/899 - (40%) |
---|---|---|---|
Similarity: | 507/899 - (56%) | Gaps: | 139/899 - (15%) |
- Green bases have known domain annotations that are detailed below.
Fly 3 VPPSVGNGGAPP----GRGIGYTPPGAIVPQFPPPGFGAPPP--------PEL------------ 43
Fly 44 -AAAFGVMATSTE----------WTEHKAPDGRPYYYNQNTKQSSWEKPEALMTPAELLHNQCPW 97
Fly 98 KEYRSDTGKVYYHNVATKETCWEPPPEYVDMKAKAKAEEAAAAAKAVAAMTSSSLAGMVPPAALA 162
Fly 163 SILPAALPVAPRLPTPEIHSPLTPSSNEN-----SSSAMDQAM-------AATLAAIEVPQQNAK 215
Fly 216 -KDDKSESAVVFKDKREAIESFKELLRDRNVPSNANWDQCVKIISKDPRYAAFKNLNERKQTFNA 279
Fly 280 YKTQKIKDEREESRLKAKKAKEDLEQFLMSSDKMNSQMKYFRCEEVFAGTRTWTAVPEPDRRDIY 344
Fly 345 EDCIFNLAKREKEEARLLKKRNMKVLGELLESMTSINHATTWSEAQVMLLDNVAFKNDVTLLGMD 409
Fly 410 KEDALIVFEEHIRTLEKEEDEEREREKKRMKRQQRKNRDSFLALLDSLHEEGKLTSMSLWVELYP 474
Fly 475 IISADLRFSAMLGQSGSTPLDLFKFYVENLKARFHDEKKIIREILKEKAFVVQAKTSFEDFATVV 539
Fly 540 CEDKRSASLDAGNVKLTYNSLLEKAEAIEKERMKEEVRRLRKLENEIKNEWLEANVSVAEPYESA 604
Fly 605 KKLVEHLEAFALYEKEIGVE----KIWEDFVKESEDA-CSHHHSRSRK--SKKNKKHKKR--VRS 660
Fly 661 VSRSDIENEHIE-----VEKSKRRR---SKTRSHSLTSIGSIESEKLLKKKKKRKNKLRGSSCES 717
Fly 718 DVPGIQSPGTQALLQNDSNSHSPAKKKKKEKRAKKDKRHNRHNRSGTPLSPAQSVESSGSRNE-- 780
Fly 781 --------------------------------ELTLSDGELESKRAALLAQLSE 802 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG3542 | NP_608738.1 | PRP40 | 54..634 | CDD:227435 | 281/606 (46%) |
WW | 54..81 | CDD:278809 | 17/36 (47%) | ||
WW | 95..122 | CDD:278809 | 16/26 (62%) | ||
FF | 231..280 | CDD:280090 | 27/48 (56%) | ||
FF | 445..500 | CDD:280090 | 36/54 (67%) | ||
Prpf40b | XP_006257426.1 | PRP40 | 146..>641 | CDD:227435 | 238/504 (47%) |
WW | 160..185 | CDD:278809 | 17/24 (71%) | ||
WW | 199..228 | CDD:238122 | 17/28 (61%) | ||
FF | 338..387 | CDD:280090 | 27/48 (56%) | ||
P-loop_NTPase | 460..>518 | CDD:304359 | 27/57 (47%) | ||
FF | 552..607 | CDD:280090 | 36/54 (67%) | ||
FF | 693..741 | CDD:128718 | 8/49 (16%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166339130 | |
Domainoid | 1 | 1.000 | 182 | 1.000 | Domainoid score | I3373 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 1 | 1.000 | - | - | H81828 | |
Inparanoid | 1 | 1.050 | 617 | 1.000 | Inparanoid score | I855 |
OMA | 1 | 1.010 | - | - | QHG55014 | |
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0001909 | |
OrthoInspector | 1 | 1.000 | - | - | otm46059 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_101966 | |
Panther | 1 | 1.100 | - | - | O | PTHR11864 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X1440 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
12 | 11.900 |