DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp40 and Wac

DIOPT Version :10

Sequence 1:NP_608738.1 Gene:Prp40 / 33513 FlyBaseID:FBgn0031492 Length:806 Species:Drosophila melanogaster
Sequence 2:XP_006525866.1 Gene:Wac / 225131 MGIID:2387357 Length:652 Species:Mus musculus


Alignment Length:201 Identity:48/201 - (23%)
Similarity:77/201 - (38%) Gaps:51/201 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 TSTEWTEHKAPDGRPYYYNQNTKQSSWEKPEALMTPAELLHNQCPWKEYRSDTGKVYYHNVATKE 116
            ::.:|:||.:..|:.||||..|:.|.||||:      |.|..:...||             |.|.
Mouse   137 SADDWSEHISSSGKKYYYNCRTEVSQWEKPK------EWLEREQRQKE-------------ANKL 182

  Fly   117 TCWEPPPEYVDMKAKAKAEEAAAAAKAVAAMT---SSSLAGMVPPAAL----------------- 161
            .....|.   |...:.:..:|.|.:...:.|.   ||..:.::|...|                 
Mouse   183 AVNSFPK---DRDYRREVMQATATSGFTSGMEDKHSSDASSLLPQNILSQTSRHNDKDYRLPRAE 244

  Fly   162 --ASILPAALPVAP-----RLPTPEIHSPLTPSSNENSSSAMDQAMAATLAAIEVPQQN--AKKD 217
              :|..|...|:.|     ..|:....||.|..|:.....:.|...|:||:.:..|..:  |:|.
Mouse   245 THSSSTPVQHPIKPVVHPTATPSTVPSSPFTLQSDHQPKKSFDANGASTLSKLPTPTASLPAQKT 309

  Fly   218 DKSESA 223
            ::.|||
Mouse   310 ERKESA 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp40NP_608738.1 PRP40 54..634 CDD:227435 48/199 (24%)
WacXP_006525866.1 WW 139..166 CDD:459800 12/26 (46%)
PHA03247 <223..534 CDD:223021 21/93 (23%)

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