DRSC/TRiP Functional Genomics Resources

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Protein Alignment Prp40 and tcer-1

DIOPT Version :10

Sequence 1:NP_608738.1 Gene:Prp40 / 33513 FlyBaseID:FBgn0031492 Length:806 Species:Drosophila melanogaster
Sequence 2:NP_001370832.1 Gene:tcer-1 / 174150 WormBaseID:WBGene00022855 Length:914 Species:Caenorhabditis elegans


Alignment Length:917 Identity:195/917 - (21%)
Similarity:337/917 - (36%) Gaps:303/917 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 VPPSV-GNGG---APP---GRGIGYTPPGAIVPQFPPPGFGAPP------PPELA---------- 44
            |||:. |.||   |||   |||.|:..|| :...|.|.|.|.||      ||...          
 Worm    62 VPPAARGRGGPGMAPPGFAGRGRGFATPG-MSSGFAPRGRGMPPGRGGYMPPYRGGYGVAPNGGP 125

  Fly    45 -----------AAFGVMATSTE--------------------WTEHKAPDGRPYYYNQNTKQSSW 78
                       .|:|..|....                    |.|.:..:|:.|:|:...:.:.|
 Worm   126 GAYGGPYNGGPGAYGAQAPGPNPQDQEQRLKRLSGCEEGQELWVETETAEGKKYFYHPVNRNTIW 190

  Fly    79 EKPE--ALMTPAELL------------------HNQCP------WKEYRSDTGKVYYHNVATKET 117
            |:|:  .::|..||.                  |.|.|      |.|:.:..|:.||.|..|:|.
 Worm   191 ERPQNAKIVTQPELAQLIHRATEEEKNREERMPHGQIPQNPDDAWNEFNAPDGRKYYFNSITQEN 255

  Fly   118 CWEPPPEYVDM-----------------KAKAKAEEAAAAAKAVAAMTSSSLAGMVPPAALASIL 165
            .||.|...:|.                 :|:|||:.|.||..|....:|:...||....|.||..
 Worm   256 TWEKPKALIDQENGGGASPEPVQSAAIAEAQAKAQAALAAFMAQQKTSSNGGGGMPLSKAQASGA 320

  Fly   166 PAALPV-----------APRLPTPE---------------------------------------- 179
            .||..|           .|...||.                                        
 Worm   321 AAAAAVNAEAAKKKDSTRPISSTPVSGTPWCVVWTGDDKVFFYNPSTKCSVWERPPDTYGREDVD 385

  Fly   180 --IHSPLTPSSNENSSSAMDQAMAATLAAIEVPQQNAKKD--DKSESAVVFKDKRE--------- 231
              :.:|.:|.:.|.::.:..::.:.:.:..:.|.: |||.  :|.:.|::...|:|         
 Worm   386 KLVQNPPSPKAEEENNQSKKESESESESDEDGPPK-AKKSRAEKKKEALIAAQKKEKERPRQMLQ 449

  Fly   232 -----AIES-------------------FKELLRDRNVPSNANWDQCVKIISKDPRYAAFKNLNE 272
                 |||:                   |||:|.::||.:::.:::.:..|..|.||.:. ...|
 Worm   450 KPVDPAIEAEMQAAKEREKVPLEERLKQFKEMLEEKNVSTSSTFEKELSKIVFDKRYLSL-GATE 513

  Fly   273 RKQTFNAYKTQKIKDEREESRLKAKKAKEDLEQFLMSSDKMNSQMKYFRCEEVFAGTRTWTAVP- 336
            |:..|:|:..:||:.|:.|.|.:.|:|||:.:: |::..::|.:..|......|.....:.||. 
 Worm   514 RRACFDAFCREKIESEKAERRKRVKEAKEEFQK-LLAECELNGRSSYSSFTSKFGKDPRYKAVER 577

  Fly   337 EPDRRDIYEDCIFNLAKREKEEARLLKKRNMKVLGELLESMTSINHATTWSEAQVMLLDN---VA 398
            ..||.|.:.|.:..|.|:||:|.|..|::......:|||..|.:...:.||..:..|.|.   :|
 Worm   578 NRDREDAFNDFVGELHKKEKDEKRAKKEKLKAAFVKLLEEQTGLTRKSKWSTTKKTLEDEERYIA 642

  Fly   399 FKNDVTLLGMDKEDALIVFEEHIRTLEKEEDEE------------------------REREKKRM 439
            ..:..|...:.:|....:.:|....:|:|::.|                        |||.|:..
 Worm   643 LDSSSTRESLFREFVANLGDETASDIEEEQEREKRLAAQTAIANRQKEVEAELGNQLRERTKESE 707

  Fly   440 KRQQRKNRDSFLALLDSLHEEGKLTSMSLWVELYPIISADLRFS--AMLGQSGSTPLDLFKFYVE 502
            |::..::.|::..||..|.   |.|..| |.|...|:..|.|::  .||.::...  .||..:::
 Worm   708 KQKMGEHEDTYRNLLIDLI---KSTENS-WHEARRILRKDERYANCDMLDKTRKE--SLFDDHIK 766

  Fly   503 NLK--------------------ARFHDEKKIIREILKEKAFVVQAKTSFEDFATVVCEDKRSAS 547
            :|:                    .|:.|.||||::  :|:.|                       
 Worm   767 SLERKRREAFFQVLDNHEKITPMMRWRDAKKIIQD--EEETF----------------------- 806

  Fly   548 LDAGNVKLTYNSLLEKAEAIEKERMKEEVRRLRKLENEIKNEWLEANVSVAEPYESAKKLVE--- 609
                 ||:..||    ...:|::....:.||...|.:|.|....|..:..    ..:|||:|   
 Worm   807 -----VKIASNS----ERKVERDFRDWQERRHDHLTDEFKEMLSETKIIT----HKSKKLMEEGE 858

  Fly   610 -HLEAFALYEKEIGVEKIWEDFVKESEDACSHHHSRSRKSKKNKKHKKRVRSVSRSDIENEHIEV 673
             |::..::.|.    :|.|......|            .|::::..:..:.::.|........:.
 Worm   859 QHMDILSVLEN----DKRWVRMTAMS------------ASERDRMLEDHIENLGRKGTPPPPTQQ 907

  Fly   674 EKSKRRR 680
            |:.:|::
 Worm   908 ERDRRKQ 914

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Prp40NP_608738.1 PRP40 54..634 CDD:227435 164/784 (21%)
tcer-1NP_001370832.1 WW 168..195 CDD:197736 8/26 (31%)
PRP40 235..>820 CDD:227435 136/627 (22%)
FF 834..891 CDD:426471 13/76 (17%)

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