DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha4GT1 and A4galt

DIOPT Version :9

Sequence 1:NP_608737.1 Gene:alpha4GT1 / 33512 FlyBaseID:FBgn0031491 Length:369 Species:Drosophila melanogaster
Sequence 2:XP_036015294.1 Gene:A4galt / 239559 MGIID:3512453 Length:359 Species:Mus musculus


Alignment Length:308 Identity:108/308 - (35%)
Similarity:153/308 - (49%) Gaps:29/308 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    66 ADPKPS-PGNSIFFHETSCRLSENRQLETLKVTARQACAIESAAMHNPNFQVFVLFAG-PTYRIS 128
            |.|:.| ||| |||.|||.|.|.|...         .|::||||..:|..||.||..| |    .
Mouse    75 AFPRVSAPGN-IFFLETSDRTSPNFLF---------MCSVESAARAHPESQVVVLMKGLP----R 125

  Fly   129 NNKSHPQPLLEAILS-YSNVHLRRLNLESYASGTPMEEWLKDGRLSRSKYLFSHISDFLRYLTLY 192
            :..:.|:.|..::|| :.||.:|.|:|:.....||:..|..:.|.....|....:||..|...|:
Mouse   126 DTTAQPRNLGISLLSCFPNVWIRPLDLQELFEDTPLAAWYSEARHRWEPYQLPVLSDASRIALLW 190

  Fly   193 RYGGLYLDMDVVVLRNMEKVPPNYTGAESNTHLAAGVMNLAATGF--GHEIAASCLRDFQHNFNG 255
            ::||:|||.|.:||:|:..: .|..|.:|..     |:|.|...|  .||..|.||.||..|:||
Mouse   191 KFGGIYLDTDFIVLKNLLNL-TNTLGIQSRY-----VLNGAFLAFERKHEFLALCLHDFVANYNG 249

  Fly   256 GDWGNNGPGVITRVAQKICGTKDIALMREDPKRCMGFKVFGRGAFYAVPWKQWRDFFEPENLEET 320
            ..||:.||.::|||.:|.|..:.:    |....|.|.......|||.:||:.|:.:||..:.||.
Mouse   250 WIWGHQGPQLLTRVFKKWCSIQSL----EKSHACRGVTALPPEAFYPIPWQNWKKYFEDISPEEL 310

  Fly   321 IARCKDSYVVHVWNKHSSKLPIKIGSKNAYALYAEQNCPRSYKAAGEY 368
            ......:|.||||||.|....::..||...|....:.||.:::|...|
Mouse   311 TQLLNATYAVHVWNKKSQGTHLEATSKALLAQLHARYCPTTHRAMKMY 358

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha4GT1NP_608737.1 Gly_transf_sug 99..217 CDD:282357 40/119 (34%)
Gb3_synth 239..365 CDD:282437 45/125 (36%)
A4galtXP_036015294.1 Gly_transf_sug 100..220 CDD:398274 42/133 (32%)
Gb3_synth 233..355 CDD:398326 45/125 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845777
Domainoid 1 1.000 94 1.000 Domainoid score I7455
eggNOG 1 0.900 - - E1_KOG1928
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H9690
Inparanoid 1 1.050 156 1.000 Inparanoid score I4275
Isobase 1 0.950 - 0 Normalized mean entropy S7577
OMA 1 1.010 - - QHG47281
OrthoDB 1 1.010 - - D1082380at2759
OrthoFinder 1 1.000 - - FOG0000423
OrthoInspector 1 1.000 - - mtm8691
orthoMCL 1 0.900 - - OOG6_104694
Panther 1 1.100 - - O PTHR12042
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R5589
SonicParanoid 1 1.000 - - X281
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
1716.750

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