DRSC/TRiP Functional Genomics Resources

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Protein Alignment alpha4GT1 and LOC100497034

DIOPT Version :9

Sequence 1:NP_608737.1 Gene:alpha4GT1 / 33512 FlyBaseID:FBgn0031491 Length:369 Species:Drosophila melanogaster
Sequence 2:XP_002941965.2 Gene:LOC100497034 / 100497034 -ID:- Length:338 Species:Xenopus tropicalis


Alignment Length:375 Identity:104/375 - (27%)
Similarity:162/375 - (43%) Gaps:71/375 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 RMFIILVLMVIGGLFYIYTSENK---------YHSCFMEGQVLATQQALTADGETNLLGDVLQAD 67
            ::.:||:.:.:..:|  |.|.||         :||...:..||                      
 Frog     6 KILLILLCLAVTAIF--YKSSNKKGRRSMPFFFHSTITQDNVL---------------------- 46

  Fly    68 PKPSPGNSIFFHETSCRLSENRQLETLKVTARQACAIESAAMHNPNFQVFVLFAG-PTYRISNNK 131
               ||||.|||.||:.|:..         .:...||:||||..||:..|.....| |......::
 Frog    47 ---SPGNGIFFIETTDRMDP---------PSLVLCAVESAARINPDRPVAFFMKGLPDINSVEDQ 99

  Fly   132 SHPQPLLEAILSYSNVHLRRLNLESYASGTPMEEWLKDGRLSRSKYLFSHI-SDFLRYLTLYRYG 195
            :........:..|:|::|..|.::.....||:..|.:.....:..: ::|: ||..|...:|:||
 Frog   100 NRALDSFPTLAPYNNIYLFPLRMDILLKDTPLLPWYQQVNPEKEVH-WAHVSSDASRLALMYKYG 163

  Fly   196 GLYLDMDVVVLRNMEKVP-PNYTGAESNTHLAAGVMNLAATGFG--HEIAASCLRDFQHNFNGGD 257
            |||:|.|::.||   .|| .|:..||||...:.||.     ||.  .:...:|:.||..|:||..
 Frog   164 GLYMDTDIISLR---PVPVENFLVAESNQLSSNGVF-----GFNSHRDFTWTCMEDFVKNYNGAI 220

  Fly   258 WGNNGPGVITRVAQKI-CGTKDIALMREDPK-RCMGFKVFGRGAFYAVPWKQWRDFFEPENLEET 320
            ||:.||.:.|||.::. |   ||...:.|.. :|..........||.:..:.|..|||......|
 Frog   221 WGHQGPALFTRVLRQFYC---DIPPFKGDEDLKCGNVSFLNPRRFYPIECRFWMRFFEVWKAFPT 282

  Fly   321 IARCKDSYVVHVWN-KHSSKLPIKIGSKNAYA--LYAEQNCPRSYKAAGE 367
            ..   |||.:|::| .:..:..:.:...|...  ||. ||||.:|:|..|
 Frog   283 FV---DSYALHLFNYANRGERRVMVPGSNTLVEHLYV-QNCPATYEAVLE 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
alpha4GT1NP_608737.1 Gly_transf_sug 99..217 CDD:282357 35/120 (29%)
Gb3_synth 239..365 CDD:282437 38/130 (29%)
LOC100497034XP_002941965.2 Gly_transf_sug 64..176 CDD:388717 32/115 (28%)
Gb3_synth 204..326 CDD:368001 38/128 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 66 1.000 Domainoid score I9755
eggNOG 00.000 Not matched by this tool.
Hieranoid 1 1.000 - -
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 123 1.000 Inparanoid score I4577
OMA 1 1.010 - - QHG47281
OrthoDB 1 1.010 - - D503304at33208
OrthoFinder 1 1.000 - - FOG0000423
OrthoInspector 1 1.000 - - mtm9340
Panther 1 1.100 - - O PTHR12042
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X281
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
1010.080

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