DRSC/TRiP Functional Genomics Resources

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Protein Alignment HTR1B and Dop2R

DIOPT Version :10

Sequence 1:NP_000854.1 Gene:HTR1B / 3351 HGNCID:5287 Length:390 Species:Homo sapiens
Sequence 2:NP_001014758.2 Gene:Dop2R / 33007 FlyBaseID:FBgn0053517 Length:905 Species:Drosophila melanogaster


Alignment Length:532 Identity:139/532 - (26%)
Similarity:205/532 - (38%) Gaps:202/532 - (37%)


- Green bases have known domain annotations that are detailed below.


Human    48 WKVLLVMLLALITLATTLSNAFVIATVYRTRKLHTPANYLIASLAVTDLLVSILVMPISTMYTVT 112
            |.::|:    |..:.|...|..||.:|.|.|.|.|..||.|.|||:.||||:::|||.:..:.|.
  Fly   378 WALILI----LFPILTLFGNILVILSVCRERSLQTVTNYFIVSLAIADLLVAVVVMPFAVYFLVN 438

Human   113 GRWTLGQVVCDFWLSSDITCCTASILHLCVIALDRYWAITDAVEYSAKRTPKRAAVMIALVWVFS 177
            |.|.|..|||||:::.|:.|.|:||.:|..|::|||.|:|..::|:..:..:|..:.|.|||..|
  Fly   439 GAWALPDVVCDFYIAMDVICSTSSIFNLVAISIDRYIAVTQPIKYAKHKNSRRVCLTILLVWAIS 503

Human   178 ISISLPPFFWRQAKAEEEVSECV-VNTDHILYTVYSTVGAFYFPTLLLIALYGRIYVEARSRILK 241
            .:|..|...........|...|. .|.|.||   ||::.:||.|.::::.||..|:...|||..|
  Fly   504 AAIGSPIVLGLNNTPNREPDVCAFYNADFIL---YSSLSSFYIPCIIMVFLYWNIFKALRSRARK 565

Human   242 QTPNR-------TG----------KRL-------------------------------------- 251
            |...|       ||          :||                                      
  Fly   566 QRAARKPHLSELTGGSVIENIAQTRRLAETALDSSRHASRILPDEAATNTASGSNEEEDENAISP 630

Human   252 ----------------------------------TRAQLIT-------DS--------------- 260
                                              |:.||:.       ||               
  Fly   631 DIDDCHVIVNDKSTEFMLATVVEETGNSVVAQITTQPQLVVADPNGNHDSGYAASNVDDVLAGVA 695

Human   261 PGSTSSVTSINSR----VPDVPSESGSPVY----------------------------------- 286
            |.|.|:.||...|    .||.|..||:.:.                                   
  Fly   696 PASASAATSAAPRSSGSPPDSPLPSGATLQRSSVSSQRRPTGDDSPKRGEPALRSVGVDNSSVAM 760

Human   287 --VNQVKVRVSDALL---------------------------------------EKKKLMAARER 310
              ::.|:..|.:|:.                                       :::|..|.:||
  Fly   761 KPLSFVRYGVQEAMTLARNDSTLSTTSKTSSRKDKKNSQASRFTIYKVHKASKKKREKSSAKKER 825

Human   311 KATKTLGIILGAFIVCWLPFFIISLVMPIC---KDACWFHLAIFDFFTWLGYLNSLINPIIYTMS 372
            ||||||.|:||.|:.||||||..:::..:|   |..|...|..:...|||||:||.:||:|||:.
  Fly   826 KATKTLAIVLGVFLFCWLPFFSCNIMDAMCAKFKKDCRPGLTAYMMTTWLGYINSFVNPVIYTIF 890

Human   373 NEDFKQAFHKLI 384
            |.:|::||.|::
  Fly   891 NPEFRKAFKKIM 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HTR1BNP_000854.1 7tmA_5-HT1B_1D 46..380 CDD:320455 136/526 (26%)
TM helix 1 51..77 CDD:320455 7/25 (28%)
TM helix 2 84..110 CDD:320455 13/25 (52%)
TM helix 3 122..152 CDD:320455 14/29 (48%)
DRY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 146..148 1/1 (100%)
TM helix 4 164..187 CDD:320455 8/22 (36%)
TM helix 5 205..234 CDD:320455 10/28 (36%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 259..281 11/40 (28%)
TM helix 6 307..337 CDD:320455 18/29 (62%)
TM helix 7 348..373 CDD:320455 13/24 (54%)
NPxxY motif, important for ligand-induced conformation changes and signaling. /evidence=ECO:0000250|UniProtKB:P41595 365..369 2/3 (67%)
Dop2RNP_001014758.2 7tmA_D2-like_dopamine_R 376..>565 CDD:320181 72/193 (37%)
TM helix 1 377..403 CDD:320181 8/28 (29%)
TM helix 2 410..436 CDD:320181 13/25 (52%)
TM helix 3 448..478 CDD:320181 14/29 (48%)
TM helix 4 490..513 CDD:320181 8/22 (36%)
TM helix 5 529..558 CDD:320181 12/31 (39%)
7tm_GPCRs <822..898 CDD:475119 36/75 (48%)
TM helix 6 828..850 CDD:320181 14/21 (67%)
TM helix 7 866..891 CDD:320181 13/24 (54%)

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