DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ccdc85 and Ccdc85a

DIOPT Version :9

Sequence 1:NP_608734.2 Gene:Ccdc85 / 33509 FlyBaseID:FBgn0031488 Length:607 Species:Drosophila melanogaster
Sequence 2:XP_038947697.1 Gene:Ccdc85a / 289855 RGDID:1311700 Length:578 Species:Rattus norvegicus


Alignment Length:553 Identity:146/553 - (26%)
Similarity:215/553 - (38%) Gaps:236/553 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 KDMLKFVRKPDQEHPSPNASVTSSGTGIPTANGGGRLTAEQNRQLQSLVNELRALKEQNQRLLDD 313
            :|:::.:|:.:.|..|  |.:..|           .|..|.||:||..:.|:|.||:.||:|.:|
  Rat    45 EDLIRSLRRAEAEKVS--AMLDHS-----------NLIREVNRRLQLHLGEIRGLKDINQKLQED 96

  Fly   314 NQELRDLCCFLDDDRQKGRKLAREWQRFGRYTASVMRQEVAAYQNKLRQLDDKQQELITDNLELK 378
            ||||||||||||||||||::::|||||.|||||.||.:|||.|..||::|:.||:|::.:|:|||
  Rat    97 NQELRDLCCFLDDDRQKGKRVSREWQRLGRYTAGVMHKEVALYLQKLKELEVKQEEVVKENMELK 161

  Fly   379 ELCLYLDEERAHVAANALCA--------GCGAATRNALRDDGDGSS-SSTNADETITALRNYA-- 432
            |||:.||||:....|.:.|:        ...|:....:||.||||| |||.:.::....:::|  
  Rat   162 ELCVLLDEEKGTGCAGSRCSIDSQASLCQLVASAAPYVRDVGDGSSTSSTGSTDSPDHHKHHASG 226

  Fly   433 ---EQRQ--------------------------------------------------LPQDLRHA 444
               |..|                                                  .|:..||.
  Rat   227 GSPEHLQKPRSEGSPEHNKHRSTSPEHLHKPRASGTPDHPKALKGPSPEHHKPLCKGSPEQQRHP 291

  Fly   445 HT--------------------------------------------------------------- 446
            |.                                                               
  Rat   292 HPGSSPEMLPKHKLSGSPEHFQKHRPGGSPEHARHSGGSPEHLQKHALGGSLEHLPRARGTSPEH 356

  Fly   447 -----------------------------------------------LNDQTLQYVRSLERRIQQ 464
                                                           :|:.||.|||.||.|::|
  Rat   357 LKQHYGGSPDHKHAGGGGGSGGGSREGTLRRPAQEDSSPHHRNVYSGMNESTLSYVRQLEARVRQ 421

  Fly   465 LEEERTTPTAHLQQPTTPTPQATPTPTVTSAATPAKSAASPHQ----QQQQQQQHQQQQQDIVAA 525
            ||||...           .||||.    ..:..|.:::::..:    :.::..|..|..:.|...
  Rat   422 LEEENRM-----------LPQATQ----NRSQPPTRNSSNMEKGWGPRARRVLQWWQGCRGIGRC 471

  Fly   526 AAAAAAAIQL-------------PEPIAG------RPEAVVRALQVLEVREQLERDRLGNLAGSA 571
            ..:...:.:|             |...:|      :||.||.:|:||:|.|.::|.:     |..
  Rat   472 LPSLPGSFRLSSGADGNNSSPNSPASFSGHTTPSQQPEPVVHSLKVLDVEETVDRQQ-----GKE 531

  Fly   572 LD-QMDDGEKALVREMCNVVWRKLEGSPHGPAA 603
            .| .:.:.|||:||||||||||||     |.||
  Rat   532 YDHDLSETEKAIVREMCNVVWRKL-----GDAA 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ccdc85NP_608734.2 DUF2216 <283..389 CDD:287229 65/105 (62%)
Ccdc85aXP_038947697.1 CCDC85 29..202 CDD:402021 75/169 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 152 1.000 Domainoid score I4239
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D1393196at2759
OrthoFinder 1 1.000 - - FOG0002221
OrthoInspector 1 1.000 - - oto98791
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR13546
Phylome 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X1655
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
77.110

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