DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and STH1

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_012140.1 Gene:STH1 / 854680 SGDID:S000001388 Length:1359 Species:Saccharomyces cerevisiae


Alignment Length:858 Identity:239/858 - (27%)
Similarity:375/858 - (43%) Gaps:193/858 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 QQELEREQELDR---RRLGALRDASNTSELPLPI-------RFT-----ANSEYELAIAKVLARK 83
            |.|.:.::.::|   :||.||:  ||..|..|.:       |.|     .||..:.....|.|::
Yeast   361 QMEKDEQKRIERTAKQRLAALK--SNDEEAYLKLLDQTKDTRITQLLRQTNSFLDSLSEAVRAQQ 423

  Fly    84 FKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVVV 148
                  |......|:.|         :|:                 |:.||...|..:| .|.:.
Yeast   424 ------NEAKILHGEEV---------QPI-----------------TDEEREKTDYYEV-AHRIK 455

  Fly   149 DP-------LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQG 206
            :.       |:...|:.:|..|:.:|   |.....:.|| |:|||||||||:|.::|:..|.   
Yeast   456 EKIDKQPSILVGGTLKEYQLRGLEWM---VSLYNNHLNG-ILADEMGLGKTIQSISLITYLY--- 513

  Fly   207 PECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGT-P 270
             |.|..|...:|:.|.|.:.||..||.||...  |...:..|| .|...:|:.    ..|:|. .
Yeast   514 -EVKKDIGPFLVIVPLSTITNWTLEFEKWAPS--LNTIIYKGT-PNQRHSLQH----QIRVGNFD 570

  Fly   271 VLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDN-LTYQALMGLKTKRRVLLSGTPIQNDLT 334
            |||.:||.......:|.|::...:|.|||||:||:.: |::......:|:.|::|:|||:||:|.
Yeast   571 VLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLP 635

  Fly   335 EYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQ 399
            |.::|:|||.|::..:|..|:..|        ||.......|..:|.|:|...|    ||||.::
Yeast   636 ELWALLNFVLPKIFNSAKTFEDWF--------NTPFANTGTQEKLELTEEETLL----IIRRLHK 688

  Fly   400 IL------------TKYLPVKFEMVICAKLTAIQLELYTNFLKSDQV----------RRSLADCN 442
            :|            .|.||.|.|.||..||:.:|.:||...||.:.:          :..:...|
Yeast   689 VLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLN 753

  Fly   443 EKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFM 507
            .|        |..|:|||:||.:           |:..:.|:..:....||...::|||.|||.:
Yeast   754 NK--------IMQLRKICNHPFV-----------FDEVEGVVNPSRGNSDLLFRVAGKFELLDRV 799

  Fly   508 LAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLF 572
            |...:|.|: :|::....||.:|:.|...|.:...::||||:...::|:::::.||.|:||.|.|
Yeast   800 LPKFKASGH-RVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCF 863

  Fly   573 MLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQR 637
            :||::|||.||||..|:.:.:||.||||..|.||..|..|.|||....|.||:.:.|:||.||:|
Yeast   864 LLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILER 928

  Fly   638 QTHKKSLSSTII-----DNNESAEKH--FTR-------------------DDLKDLF--TFDANI 674
            ...|..:...:|     ||..:||:.  |.|                   |:|.|..  :.|..|
Yeast   929 AMQKLDIDGKVIQAGKFDNKSTAEEQEAFLRRLIESETNRDDDDKAELDDDELNDTLARSADEKI 993

  Fly   675 LSDTHDKLKCKR-----CVQNIQMKPP---------------------PEDTDCTSHLSQWYHCS 713
            |.|..||.:..:     ..|.:::.||                     .||::....:.|.....
Yeast   994 LFDKIDKERMNQERADAKAQGLRVPPPRLIQLDELPKVFREDIEEHFKKEDSEPLGRIRQKKRVY 1058

  Fly   714 NNRGLPDNILAQAWMDCK-CVSFVFHHRSQAQE----IVPSAEEEATDQPEEKPES------RKR 767
            .:.||.:....:|..|.. .:......|.:|:|    .....:|...:..|..||:      ...
Yeast  1059 YDDGLTEEQFLEAVEDDNMSLEDAIKKRREARERRRLRQNGTKENEIETLENTPEASETSLIENN 1123

  Fly   768 SSTPASDDSADED 780
            |.|.|.|:..:.|
Yeast  1124 SFTAAVDEETNAD 1136

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 6/49 (12%)
HepA <156..650 CDD:440319 174/522 (33%)
DEXHc_RAD54A 156..396 CDD:350825 82/241 (34%)
STH1NP_012140.1 HSA 312..378 CDD:462194 3/16 (19%)
PLN03142 370..>955 CDD:215601 204/666 (31%)
SnAC 1006..1069 CDD:464219 8/62 (13%)
COG5076 <1211..>1359 CDD:227408
Blue background indicates that the domain is not in the aligned region.

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