DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment okr and ISW2

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_014948.1 Gene:ISW2 / 854480 SGDID:S000005831 Length:1120 Species:Saccharomyces cerevisiae


Alignment Length:836 Identity:219/836 - (26%)
Similarity:370/836 - (44%) Gaps:180/836 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    27 KKNKRSCQQELEREQELDRRRLGALRDASNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDNY 91
            |.|..|....:.:.:||..:.:..:.|.        |..:.|..:          :||.:.:|  
Yeast    31 KSNGSSDDDNIGQSEELSDKEIYTVEDR--------PPEYWAQRK----------KKFVLDVD-- 75

  Fly    92 VPDYGG-----------KRVLGV----RRCISRRPLHD----------PMACNALVLFHP--PAY 129
             |.|..           |.:|||    |..|..:..||          ....|.|...|.  .:.
Yeast    76 -PKYAKQKDKSDTYKRFKYLLGVTDLFRHFIGIKAKHDKNIQKLLKQLDSDANKLSKSHSTVSSS 139

  Fly   130 TEHER---------MGMDPTKVLVHVVVDPLL---------SNILRPHQREGVRFMYECVEGKRG 176
            :.|.|         :..|..:.:|....:.:.         |..||.:|.:|:.::....|.|..
Yeast   140 SRHHRKTEKEEDAELMADEEEEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLS 204

  Fly   177 NFNGCIMADEMGLGKTLQCVTLVWTL--LRQ--GPECKPTINKAIVVSPSSLVKNWEKEFTKW-- 235
            .    |:|||||||||||.::.:..|  ::|  ||        .:::.|.|.:.||.:||.||  
Yeast   205 G----ILADEMGLGKTLQTISFLGYLRYVKQIEGP--------FLIIVPKSTLDNWRREFLKWTP 257

  Fly   236 ------LHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMV 294
                  |||       :..|:.:.:|.:    :..||.  .||:.|||........|.:.....:
Yeast   258 NVNVLVLHG-------DKDTRADIVRNI----ILEARF--DVLITSYEMVIREKNALKRLAWQYI 309

  Fly   295 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFE 359
            :.||.||:||..:...|.:....:|.|:|::|||:||:|.|.::|:||:.|::.|.:.:|...||
Yeast   310 VIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFE 374

  Fly   360 SAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLEL 424
                  ||  ::||:::..|   |:|..:::..::||....:.|.|..|.|..:...:|.:|::.
Yeast   375 ------QN--NSEQDQEIVI---QQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQW 428

  Fly   425 YTNFLKS--DQVRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSN 487
            |.:.|:.  |.|..::.....|..|  |..:..|:|.|:||.|           ||.::   |. 
Yeast   429 YKSLLEKDIDAVNGAVGKREGKTRL--LNIVMQLRKCCNHPYL-----------FEGAE---PG- 476

  Fly   488 YKPKDLNPEL---SGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGT 549
             .|...:..|   |||.::||.:|..::.:|: :|::.|..::.||:.|.....|.:.:.|:||:
Yeast   477 -PPYTTDEHLIFNSGKMIILDKLLKRLKEKGS-RVLIFSQMSRLLDILEDYCYFRDFEYCRIDGS 539

  Fly   550 MSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDG 614
            .|.::|.:.:|.:|.|.|:.|:|:|:::|||.|:||:.|:.:.:||.||||..|.|||.|..|.|
Yeast   540 TSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIG 604

  Fly   615 QKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIID---NNESAEKHFTRDDLKDLFTFDA-NIL 675
            |||..::||.|...:||||:::|...|..|...:|.   ..::|....::|||.|:..|.| |:.
Yeast   605 QKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKNMF 669

  Fly   676 SDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHCSNNRGLPD--------NILAQAWMDCKC 732
            .....|:.....:.:|..|...:    |..|:..|   .:.||.|        |..|..|..   
Yeast   670 EKKASKVTVDADIDDILKKGEQK----TQELNAKY---QSLGLDDLQKFNGIENQSAYEWNG--- 724

  Fly   733 VSFVFHHRSQAQEIVPSAEEEATDQPEE-----KPESRKRSSTPASDDSADEDFRG 783
                           .|.::::.|:..|     :.|.|:..:|.:.||...|...|
Yeast   725 ---------------KSFQKKSNDKVVEWINPSRRERRREQTTYSVDDYYKEIIGG 765

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 15/74 (20%)
HepA <156..650 CDD:440319 159/510 (31%)
DEXHc_RAD54A 156..396 CDD:350825 75/251 (30%)
ISW2NP_014948.1 PLN03142 1..1093 CDD:215601 219/836 (26%)

Return to query results.
Submit another query.