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Protein Alignment okr and CHR11

DIOPT Version :10

Sequence 1:	NP_476661.1	Gene:	okr / 33507	FlyBaseID:	FBgn0002989	Length:	784	Species:	Drosophila melanogaster
Sequence 2:	NP_001189826.1	Gene:	CHR11 / 819814	AraportID:	AT3G06400	Length:	1057	Species:	Arabidopsis thaliana

Alignment Length:	742	Identity:	188/742 - (25%)
Similarity:	315/742 - (42%)	Gaps:	160/742 - (21%)

- Green bases have known domain annotations that are detailed below.

  Fly   125 HPPAYTEHER------------MGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGN 177
            |....||.|.            .|...|::|..   ...:...:|.:|..|:.::....|   ..
plant   149 HASKITEEEEDEEYLKEEEDGLTGSGNTRLLTQ---PSCIQGKMRDYQLAGLNWLIRLYE---NG 207

  Fly   178 FNGCIMADEMGLGKTLQCVTLVWTLLR----QGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHG 238
            .|| |:|||||||||||.::|:..|..    .||.        :||:|.|.:.||..|..::. .
plant   208 ING-ILADEMGLGKTLQTISLLAYLHEYRGINGPH--------MVVAPKSTLGNWMNEIRRFC-P 262

  Fly   239 RLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLK 303
            .|..:...|..:|.  |.:.:..:.:.:.  .:.:.|:|........|.::....:|.||.||:|
plant   263 VLRAVKFLGNPEER--RHIREDLLVAGKF--DICVTSFEMAIKEKTALRRFSWRYIIIDEAHRIK 323

  Fly   304 NSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNT 368
            |.::|..:.:....|..|:|::|||:||:|.|.::|:||:.||:..:|..|...|:   :.|:|
plant   324 NENSLLSKTMRLFSTNYRLLITGTPLQNNLHELWALLNFLLPEIFSSAETFDEWFQ---ISGEN- 384

  Fly   369 DSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQ 433
               :|:     |..|:|..::...::||....:.|.||.|.|.::...::.:|.:.|...|:.|
plant   385 ---DQQ-----EVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETILKVGMSQMQKQYYKALLQKD- 440

  Fly   434 VRRSLADCNEKASLTALADIT-TLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPEL 497
                |...|.......|.:|. .|:|.|:||.|           |:.::...|  |...|.....
plant   441 ----LEAVNAGGERKRLLNIAMQLRKCCNHPYL-----------FQGAEPGPP--YTTGDHLITN 488

  Fly   498 SGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRF 562
            :||.:|||.:|..:: |.:.:|::.|..|:.||:.|.....|.|.:.|:||.....:|...::.:
plant   489 AGKMVLLDKLLPKLK-ERDSRVLIFSQMTRLLDILEDYLMYRGYLYCRIDGNTGGDERDASIEAY 552

  Fly   563 NDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVAS 627
            |.|.|:.|:|:||::|||.|:||..|:.:.::|.||||..|.||..|..|.||||...::|....
plant   553 NKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTE 617

  Fly   628 GSIEEKILQRQTHKKSLSSTIIDNNESAE------------------------------------ 656
            .:||||:::|...|.:|.:.:|.....||
plant   618 SAIEEKVIERAYKKLALDALVIQQGRLAEQKTVNKDELLQMVRYGAEMVFSSKDSTITDEDIDRI 682

  Fly   657 ---------------KHFTRDDLK---------DLFTFDANILSDTHD--KLKCKRCVQNIQMKP 695
                           |.||.|.::         |.:.||    .|..|  ||..|:.|.:....|
plant   683 IAKGEEATAELDAKMKKFTEDAIQFKMDDSKGADFYDFD----DDNKDENKLDFKKIVSDNWNDP 743

  Fly   696 PPEDTDCTSHLSQWYHCSNNRGLPD-------------------NILAQAWMDCKCVSFVF--HH 739
            |..:.......|:::..:..:|.|.                   ||.....:..|.|.::.  |.
plant   744 PKRERKRNYSESEYFKQTLRQGAPAKPKEPRIPRMPQLHDFQFFNIQRLTELYEKEVRYLMQTHQ 808

  Fly   740 RSQAQEIVPSAEEE-----ATDQPEEK 761
            ::|.::.:...|.|     .|::.|||
plant   809 KNQLKDTIDVEEPEGGDPLTTEEVEEK 835

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.