Protein Alignment okr and CHR34

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_001325209.1
• Gene: CHR34 / 816684
• AraportID: AT2G21450
• Length: 823
• Species: Arabidopsis thaliana
• Alignment Length: 606
• Identity: 156/606 - (25%)
• Similarity: 274/606 - (45%)
• Gaps: 123/606 - (20%)

  Fly   141 KVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQ 205
            |:.:|    |.....:||||.||.||:  |.........|||:|...|.|||...::.:.:.:..
plant   261 KMFIH----PWHDQEMRPHQTEGFRFL--CNNLAADEPGGCILAHAPGSGKTFLLISFLQSFMAM 319

  Fly   206 GPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCL---PMEGGTKENTIRALEQFSMTSARL 267
            .|:.:|     :||.|..::::|::|||.|...::..|   .::..:::..::.|.|:....:
plant   320 DPQARP-----LVVLPKGIIESWKREFTLWEVEKIPLLDFYSVKAESRKQQLKVLGQWIKERS-- 377

  Fly   268 GTPVLLISYETFRIYAEILC--KYEVG-------------MVICDEGHRLKNSDNLTYQALMGLK 317
               :|.:.|:.|   ..|:|  .:|..             ::|.||||..:|.:.....:|..:|
plant   378 ---ILFLGYQQF---TRIICDDNFEAASEDCKLILLEKPTLLILDEGHTSRNKETYMLSSLARVK 436

  Fly   318 TKRRVLLSGTPIQNDLTEYYSLVNFVNPEML---GTAAVFKRNFESA-ILRGQNTDSTEQERQRA 378
            |:|:|:|:||..||::.|.:::::.|.|:.|   ||..:..|....| |.||:..:.:..    :
plant   437 TRRKVVLTGTLFQNNVEEVFNILDLVRPKFLKRPGTREIVSRIMSKAEIPRGKQVNQSSS----S 497

  Fly   379 IEKTQELIGLVDQCIIRRTN----------------QIL-------TKYLPVKFEMVICAKLTAI 420
            ||.|  ....|:..:.|.||                .||       :..||...|..:...|::|
plant   498 IEGT--FFAAVELTLQRSTNFSAKASLIKDLREMTRNILHYHKADFSGLLPGLSEFTVMLNLSSI 560

  Fly   421 QLELYTNFLKSDQVR--RSLADCNEKASLTALADITTLKKICSHPDL---IYEKLTAREKGF-EN 479
            |         .|:|:  |.: :..::.||.|...|        ||.|   :.|..:..|||| :|
plant   561 Q---------RDEVKGLRKM-ELFKQISLGAALYI--------HPKLKSFLEENPSNGEKGFSDN 607

  Fly   480 SQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGF- 543
            :..|:..:...|.:|.....|......:||...:.| :|:::.|.|...:...|:|....| |:
plant   608 NTTVMKLDKMLKKINVRDGVKMKFFLNLLALCESTG-EKLLVFSQYIVPIKTLERLMSSMK-GWR 670

  Fly   544 -----VRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPAND 603
                 ..:.|..|.::|...::|||: ..::.:|..|.||.|.|::|:||:|:.:.|...||:..
plant   671 LGKEMFTITGDSSNEQREWSMERFNN-SLEAKVFFGSIKACGEGISLVGASRVLILDVHLNPSVT 734

  Fly   604 EQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSS----------------TIIDNN 652
            :||:||.:|.|||:..|.|:|||:.|.||:..:..|.|:.:|.                ..||.:
plant   735 QQAVARAYRPGQKRKVYAYKLVAADSPEEENYETCTRKEMMSKMWFEWNVGSGREDFGFRAIDAD 799

  Fly   653 ESAEKHF----TRDDLKDLFT 669
            .|.:...    .::|:|.|:|
plant   800 HSGDAFLETTKMKEDIKCLYT 820

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137
		HepA	<156..650	CDD:440319	146/566 (26%)
		DEXHc_RAD54A	156..396	CDD:350825	67/261 (26%)
CHR34	NP_001325209.1	HepA	<271..772	CDD:440319	144/542 (27%)
		DEAD-like_helicase_N	272..486	CDD:475120	60/228 (26%)