DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and Chd1l

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_080815.1 Gene:Chd1l / 68058 MGIID:1915308 Length:900 Species:Mus musculus


Alignment Length:689 Identity:206/689 - (29%)
Similarity:300/689 - (43%) Gaps:135/689 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   127 PAYTEHERMGMDPTKVLVHVVVDP------LLSNILRPHQREGVRFMYECVEGKRGNFNGCIMAD 185
            ||  ||   |.:|.:..|.   :|      |....||.:|.|||.::.:|...:    ||||:.|
Mouse    13 PA--EH---GPEPLRTRVQ---EPDLQQWGLTGIRLRSYQLEGVNWLVQCFHCQ----NGCILGD 65

  Fly   186 EMGLGKTLQCVT----LVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPME 246
            |||||||.|.:.    ||..|..:||        .:|:.|.|::.||::|..::..| |.|:...
Mouse    66 EMGLGKTCQTIALLIYLVGRLNDEGP--------FLVLCPLSVLSNWKEEMERFAPG-LSCVTYT 121

  Fly   247 GGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQ 311
             |.||...|..:.....|   |..|||.:||.....|..|..:...::..||.|||||..:|.::
Mouse   122 -GDKEERARLQQDLRQES---GFHVLLTTYEICLKDASFLKSFSWSVLAVDEAHRLKNQSSLLHR 182

  Fly   312 ALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQ 376
            .|.......|:||:||||||.|.|.|||:..|.|::.     .:...|..:.|.|:   .|:|.:
Mouse   183 TLSEFSAVFRLLLTGTPIQNSLRELYSLLCVVEPDLF-----CREQVEDFVQRYQD---IEKESK 239

  Fly   377 RAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADC 441
            .|    .||..|:...::||....:...||.|.|:|:...::|:|.:.|...|..|      .|.
Mouse   240 SA----SELHRLLQPFLLRRVKAQVATELPKKTEVVVYHGMSALQKKYYKAILMKD------LDA 294

  Fly   442 --NEKASLTALADI-TTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFML 503
              ||.|....|.:| |.|:|...||.|.              ..|.|..::..:...|.|||..|
Mouse   295 FENETAKKVKLQNILTQLRKCVDHPYLF--------------DGVEPEPFEVGEHLIEASGKLHL 345

  Fly   504 LDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRF-NDPES 567
            ||.:||.:.: |..:|:|.|..|..||:.:.....|.|.:.|:||::..::|...:..| |.|  
Mouse   346 LDRLLAFLYS-GGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAIKNFGNQP-- 407

  Fly   568 DSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEE 632
             .|:|:||::|||.|:||..|:.:...|.|:||.||.||.||..|.||.|...:.||:...::||
Mouse   408 -IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVKVIRLIGRDTVEE 471

  Fly   633 KILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFD---ANILSDTHDKLKCKRCVQNIQMK 694
            .:.::...|..|::.:|:..     |||....|.....|   :.||....|||...   :...| 
Mouse   472 IVYRKAASKLQLTNMVIEGG-----HFTPGAQKPSAEADFQLSEILKFGLDKLLSS---EGSSM- 527

  Fly   695 PPPEDTDCTSHL-----SQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEA 754
               ||.|..|.|     .||        .||.:.|.|                       |....
Mouse   528 ---EDIDLKSILGETKDGQW--------TPDALPAAA-----------------------AAGGG 558

  Fly   755 TDQPEEKPESRKRS---------STPASDDSADEDFRGF 784
            :.:|||..|...||         ....|.:.:.||.:.|
Mouse   559 SLEPEEGSELESRSYENHMYLFEGRDYSKEPSKEDRKSF 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137
HepA <156..650 CDD:440319 163/501 (33%)
DEXHc_RAD54A 156..396 CDD:350825 81/243 (33%)
Chd1lNP_080815.1 PLN03142 39..>549 CDD:215601 184/582 (32%)
DEAH box 168..171 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 546..569 9/45 (20%)
Regulatory linker segment (RLS). /evidence=ECO:0000250|UniProtKB:Q86WJ1 606..640
Required for ATPase activity. /evidence=ECO:0000250|UniProtKB:Q86WJ1 620..678
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 641..673
Macro_Poa1p-like_SNF2 721..871 CDD:394880
Blue background indicates that the domain is not in the aligned region.

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