DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment okr and CHD8

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001164100.1 Gene:CHD8 / 57680 HGNCID:20153 Length:2581 Species:Homo sapiens


Alignment Length:838 Identity:217/838 - (25%)
Similarity:363/838 - (43%) Gaps:188/838 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 LKKNKRSCQQELEREQELDRRRLGALRDASNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDN 90
            |:|:|| ..|:|:|    .:.::..:|...:..|.|.      |.:| :.:.::|.....:..||
Human   688 LEKDKR-IHQKLKR----FKTKMAQMRHFFHEDEEPF------NPDY-VEVDRILDESHSIDKDN 740

  Fly    91 YVP----------------------DYGGKRVLGVRRCISRRP----LHDPMAC--NALVLFHPP 127
            ..|                      |....::...:|..||.|    ::.|.|.  ..|.|.|  
Human   741 GEPVIYYLVKWCSLPYEDSTWELKEDVDEGKIREFKRIQSRHPELKRVNRPQASAWKKLELSH-- 803

  Fly   128 AYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFM----YECVEGKRGNFNGCIMADEMG 188
               |::.                  .|.||.:|.|||.::    |        |...||:|||||
Human   804 ---EYKN------------------RNQLREYQLEGVNWLLFNWY--------NRQNCILADEMG 839

  Fly   189 LGKTLQCVTL---VWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTK 250
            ||||:|.:..   |:.:...||        .:|::|.|.:.|||:||..|             |:
Human   840 LGKTIQSIAFLQEVYNVGIHGP--------FLVIAPLSTITNWEREFNTW-------------TE 883

  Fly   251 ENTI---------RALEQFSM----TSARL--GT---PVLLISYETFRIYAEILCKYEVGMVICD 297
            .|||         :.::|:.|    :..||  |.   ..|:.::|........|.:.|...||.|
Human   884 MNTIVYHGSLASRQMIQQYEMYCKDSRGRLIPGAYKFDALITTFEMILSDCPELREIEWRCVIID 948

  Fly   298 EGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAI 362
            |.|||||.:.....:|..:..:.:|||:|||:||.:.|.:||::|:.|....:.:.|.::|... 
Human   949 EAHRLKNRNCKLLDSLKHMDLEHKVLLTGTPLQNTVEELFSLLHFLEPSQFPSESEFLKDFGDL- 1012

  Fly   363 LRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTN 427
                   .||       |:.|:|..::...::||..:.:.|.|..|.|.:|..:||.||.:.|..
Human  1013 -------KTE-------EQVQKLQAILKPMMLRRLKEDVEKNLAPKQETIIEVELTNIQKKYYRA 1063

  Fly   428 FLKSDQVRRSLADCNEKASLTALADITT----LKKICSHPDLI---YEKLTAREKGFENSQNVLP 485
            .|:     ::.:..::.|..|.:.::..    |:|.|:||.||   .||:...   |..:.:::|
Human  1064 ILE-----KNFSFLSKGAGHTNMPNLLNTMMELRKCCNHPYLINGAEEKILTE---FREACHIIP 1120

  Fly   486 SNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTM 550
            .::..:.: ...:||.:|:|.:|..::| |..||::.|...:.||:.|....:|:|.:.|:||.:
Human  1121 HDFHLQAM-VRSAGKLVLIDKLLPKLKA-GGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRV 1183

  Fly   551 SIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQ 615
            ....|...:|||:.|:||.|:|:|.::|||.|:||..|:...:||.||||.||.||.||..|.||
Human  1184 RGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQ 1248

  Fly   616 KKPCYIYRLVASGSIEEKILQRQTHKKSLSSTII------DNNESAEKHFTRDDLKDLFTFDANI 674
            .|...:|||:...|.|.::..:.:.|..|...::      |.|.:..:.|::.:::||....|..
Human  1249 SKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMSGRDGNITGIQQFSKKEIEDLLRKGAYA 1313

  Fly   675 LSDTHDKLKCKRCVQNIQMKPPPEDTDCT--------SHLSQWYHCSNNR---GLPDNILAQAW- 727
            .....|....|.|.::|........|..|        :.....:..|.||   .|.|....|.| 
Human  1314 AIMEEDDEGSKFCEEDIDQILLRRTTTITIESEGKGSTFAKASFVASENRTDISLDDPNFWQKWA 1378

  Fly   728 -----------------MDCKCVSFVFHHRS--QAQEIVPSAEEEATDQPEEKPESRK 766
                             :|...|.....|.|  :..::|..::.|:.|  :|:|.||:
Human  1379 KKADLDMDLLNSKNNLVIDTPRVRKQTRHFSTLKDDDLVEFSDLESED--DERPRSRR 1434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 13/77 (17%)
HepA <156..650 CDD:440319 159/531 (30%)
DEXHc_RAD54A 156..396 CDD:350825 75/264 (28%)
CHD8NP_001164100.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 22..114
PHA03247 <68..280 CDD:223021
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 253..283
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 349..392
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 429..582
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 596..615
CD1_tandem_CHD5-9_like 638..703 CDD:349315 7/19 (37%)
CD2_tandem_CHD5-9_like 721..779 CDD:349310 7/58 (12%)
PLN03142 810..>1409 CDD:215601 181/652 (28%)
DEXHc_CHD8 811..1032 CDD:350818 75/264 (28%)
DEAH box. /evidence=ECO:0000255|HAMAP-Rule:MF_03071 948..951 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1692..1712
Interaction with FAM124B. /evidence=ECO:0000255|HAMAP-Rule:MF_03071, ECO:0000269|PubMed:23285124 1789..2302
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1991..2116
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2189..2229
BRK 2310..2354 CDD:197800
BRK 2379..2419 CDD:197800
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2481..2581
Blue background indicates that the domain is not in the aligned region.

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