Protein Alignment okr and chd6

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: XP_699360.5
• Gene: chd6 / 570753
• ZFINID: ZDB-GENE-130530-559
• Length: 2953
• Species: Danio rerio
• Alignment Length: 954
• Identity: 232/954 - (24%)
• Similarity: 368/954 - (38%)
• Gaps: 243/954 - (25%)

  Fly     7 PSQRGPLRPESRHSFTPPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSELPLPIRFTANSE 71
            ||:|| .:|:.:.:..|...||.||.....||..:..|...|..|......|..|:      ::.
Zfish   192 PSKRG-RKPKEQGAMPPEKKKKGKRKSDAVLEMVESDDTASLSTLATGGEESTDPM------DNT 249

  Fly    72 YELAIAKVLARKFKVPMDNYVPDYGGK--RVLG--------------------------VRRCIS 108
            ...:..:|..||:...:|..|.|..|:  .|||                          :.:.:|
Zfish   250 KRRSGRQVKRRKYNEDLDFKVVDDDGETIAVLGSGRIAAMSSSTLAWQAEEPPEDEANIIEKILS 314

  Fly   109 RRPLHDPMA----------------------CNALVL--------FHP----------------- 126
            .|.::..||                      |....|        .|.
Zfish   315 VRTVNKEMAPDEPPEEMEEFYVKYRNFSYLHCKWATLEELEKDPRIHQKIKRFRNKQAQMKHIFT 379

  Fly   127 --------PAYTEHERM------------------------------------GMDPTKV----- 142
                    |.|.|.:|:                                    .:||.|:
Zfish   380 EPDEDLFNPDYIEVDRVLEIAITTDTETGEEVTHYLVKWCSLSYEESTWELQEDVDPVKIKEFEE 444

  Fly   143 ------LVHVVVDPL--------------LSNILRPHQREGVRFM----YECVEGKRGNFNGCIM 183
                  :.| |..||              ..|.||.:|.||:.::    |        |...||:
Zfish   445 LKKVPEMKH-VERPLPEQWQKLEKSRDYRNGNQLREYQLEGMNWLLFNWY--------NRKNCIL 500

  Fly   184 ADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKW-------LHG--- 238
            |||||||||:|.:|.::.:...|..     ...::::|.|.:.|||:||..|       .||
Zfish   501 ADEMGLGKTIQSITFLYEIFLMGLR-----GPFLIIAPLSTITNWEREFRTWTEMNVIVYHGSQI 560

  Fly   239 -RLLCLPMEGGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRL 302
             |.:.|..|...::      ||.::.|.......::.::|........|.|.....|:.||.|||
Zfish   561 SRQMILQYEMYHRD------EQGNIMSGEFKFQGVITTFEMIMADCPELKKINWRCVVIDEAHRL 619

  Fly   303 KNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQN 367
            ||.:....:.|..:..:.:|||:|||:||.:.|.:||:||:.|....:...|...|...
Zfish   620 KNRNCKLLEGLKLMNLEHKVLLTGTPLQNSVEELFSLLNFLEPSQFPSETTFLEEFGDL------ 678

  Fly   368 TDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSD 432
              .||       |:.::|..::...::||....:.|.|..|.|.:|..:||.||.:.|...|:.:
Zfish   679 --KTE-------EQVKKLQAILKPMMLRRLKDDVEKNLAPKEETIIEVELTNIQKKYYRAILEKN 734

  Fly   433 QVRRSLA-DCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNP- 495
            ..  .|| ..|:......:..:..|:|.|:||.||   ..|.||..|:.:....|:.....|..
Zfish   735 FA--FLAKGANQHNMPNLINTMMELRKCCNHPYLI---TGAEEKILESFRKTYSSDAADFQLQAM 794

  Fly   496 -ELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVV 559
             :.:||.:|:|.:|..:.| |..||::.|...:.||:.|....:|:|.:.|:||.:....|...:
Zfish   795 IQAAGKLVLIDKLLPKLLA-GGHKVLVFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 858

  Fly   560 DRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRL 624
            |||:..:||.|:|:|.::|||.|:||..|:...:||.||||.||.||.||..|.||.|...:|||
Zfish   859 DRFSKVDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAVKVYRL 923

  Fly   625 VASGSIEEKILQRQTHKKSLSSTII-DNNESAE----KHFTRDDLKDLFTFDA-NILSDTHDKLK 683
            :...|.|.::..:.:.|..|...:: |.|....    :..::.:::||....| ..|.|..|: .
Zfish   924 ITRNSYEREMFDKASLKLGLDKAVLQDINRKGSLNGVQQLSKMEVEDLLRKGAYGALMDEEDE-G 987

  Fly   684 CKRCVQNI--------QMKPPPEDTDCTSHLSQWYHCSNNR---GLPDNILAQAWMDCKCVSFVF 737
            .|.|.::|        |......:...::.....:..|.||   .|.|....|.|.
Zfish   988 SKFCEEDIDQILQRRTQTITIQSEGKGSTFAKASFVSSGNRTDISLDDPNFWQKWA--------- 1043

  Fly   738 HHRSQAQEIVPSAEEEA--TDQPEEKPESRKRSSTPASDDSADE 779
              :....||...||:|:  .|.|..:.::|..:|  ..||...|
Zfish  1044 --KIAELEIDSKAEKESLVIDTPRVRKQTRHYNS--FEDDELME 1083

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137	16/107 (15%)
		HepA	<156..650	CDD:440319	155/512 (30%)
		DEXHc_RAD54A	156..396	CDD:350825	69/254 (27%)
chd6	XP_699360.5	CD1_tandem_CHD5-9_like	303..369	CDD:349315	7/65 (11%)
		CD2_tandem_CHD5-9_like	388..446	CDD:349310	7/57 (12%)
		PLN03142	476..>1077	CDD:215601	183/654 (28%)
		DEXHc_CHD6	477..698	CDD:350816	69/254 (27%)
		BRK	2561..2604	CDD:462196
		PHA03255	2716..>2789	CDD:165513