Protein Alignment okr and smarca1

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_001093467.1
• Gene: smarca1 / 559803
• ZFINID: ZDB-GENE-070705-296
• Length: 1036
• Species: Danio rerio
• Alignment Length: 682
• Identity: 190/682 - (27%)
• Similarity: 299/682 - (43%)
• Gaps: 144/682 - (21%)

  Fly    13 LRPESRHSFTPPLLKKNKRSCQQELEREQEL---DRRRLGALRDASNTSELPLPIRFTANSEYEL 74
            ::|.|:.|.|.||..|..|...::.|::..|   |.|.                 |.|...|.|.
Zfish    69 IQPASQKSPTSPLKVKMGRPRIKQDEKQNLLSVGDNRH-----------------RRTEQEEDEE 116

  Fly    75 AIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLF-HPPAYTEHERMGMD 138
            .:::                             ||:      |.|.||.| ..|:|
Zfish   117 LLSE-----------------------------SRK------ADNVLVRFEESPSY--------- 137

  Fly   139 PTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLL 203
                        :.:..||.:|..|:.:|....|   ...|| |:|||||||||||.:.|:..|.
Zfish   138 ------------IKNGTLRDYQIRGLNWMISLYE---NGING-ILADEMGLGKTLQTIALLGYLK 186

  Fly   204 R----QGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHG-RLLCLPMEGGTKENTIRALEQFSMT 263
            .    .||.        :|:.|.|.:.||..||.:|:.. :.:||.   |.|:.....:....|.
Zfish   187 HYRNIPGPH--------MVLVPKSTLHNWMNEFKRWVPTLKAVCLI---GNKDERAAFIRDVMMP 240

  Fly   264 SARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTP 328
            ..   ..|.:.|||.......:..|:....::.||.||:||..:...:.....||..|:||:|||
Zfish   241 GE---WDVCVTSYEMVIREKSVFKKFNWRYLVIDEAHRIKNEKSKLSEIAREFKTTNRLLLTGTP 302

  Fly   329 IQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCI 393
            :||:|.|.:||:||:.|::..:|:.|...|::..|..          |:.:|:   |..::...:
Zfish   303 LQNNLHELWSLLNFLLPDVFNSASDFDSWFDTNCLGD----------QKLVER---LHAVLRPFL 354

  Fly   394 IRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSD-QVRRSLADCNEKASLTALADITTLK 457
            :||....:.|.||.|.|:.|...|:.:|.|.||..|..| .:..|....::...|..|..   |:
Zfish   355 LRRIKAEVEKSLPPKKEVKIYLGLSKMQREWYTRILMKDIDILNSAGKMDKMRLLNILMQ---LR 416

  Fly   458 KICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPEL---SGKFMLLDFMLAAIRAEGNDKV 519
            |.|:||.|           |:.::   |.  .|...:..|   |||.:.||.:|..::.:|: :|
Zfish   417 KCCNHPYL-----------FDGAE---PG--PPYTTDTHLVINSGKMVALDKLLPKVQEQGS-RV 464

  Fly   520 VLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLN 584
            ::.|..|:.||:.|.....|.:.:.||||....:.|.:.:|.||.|.|..|:||||::|||.|:|
Zfish   465 LIFSQMTRVLDILEDYCMWRGFEYCRLDGNTPHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGIN 529

  Fly   585 LIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTII 649
            |..|:.:.::|.||||..|.|||.|..|.||:||..::||:...::||:|::|...|..|.|.:|
Zfish   530 LATADVVILYDSDWNPQVDLQAMDRAHRIGQRKPVKVFRLITDNTVEERIVERAEMKLRLDSIVI 594

  Fly   650 DNNE--SAEKHFTRDDLKDLFTFDANILSDTH 679
            ....  ..:....:|::..:....|     ||
Zfish   595 QQGRLIDQQNKLGKDEMLQMIRHGA-----TH 621

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137	7/50 (14%)
		HepA	<156..650	CDD:440319	160/502 (32%)
		DEXHc_RAD54A	156..396	CDD:350825	72/244 (30%)
smarca1	NP_001093467.1	PLN03142	54..1033	CDD:215601	190/682 (28%)