DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment okr and XNP

DIOPT Version :9

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_651398.1 Gene:XNP / 43080 FlyBaseID:FBgn0039338 Length:1311 Species:Drosophila melanogaster


Alignment Length:988 Identity:247/988 - (25%)
Similarity:411/988 - (41%) Gaps:315/988 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRRSLAPSQRGPLRPESRHSFTPPLLKKNKRSCQQE---------------LEREQELDRRRLGA 50
            ::|...|..:...:|:...|.:......:|:|.|:.               .|.|:|.:|:..|.
  Fly   249 LKRVSLPKTKPAQKPKKMSSDSEEAATTSKKSRQRRSKSESEADSDYEAPAAEEEEEEERKSSGD 313

  Fly    51 LRDASNTSE---LPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPD-----YGGKRV------- 100
            ..:|:|:|:   :|...|....||.:..            ..::.|:     .|.||:       
  Fly   314 EEEAANSSDSEVMPQRKRRRKKSESDKG------------SSDFEPEEKQKKKGRKRIKKTSSGE 366

  Fly   101 --------------LGVRRCISRRPL-------------------------------HDPMACNA 120
                          ..:|:.|..:.|                               .:.:..|.
  Fly   367 SDGDGDDDKQKNKRKHIRKIIKTKDLDLTTKEAAKEEDDRRKRIEDRQKLYNRIFVKSESVEINE 431

  Fly   121 LVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYE-CVE------GKRGNF 178
            |||    .:.|..:      |.|:.  ||..|...|:|||..||:||:: |.|      .|.|  
  Fly   432 LVL----DFDEESK------KALLQ--VDKGLLKKLKPHQVAGVKFMWDACFETLKESQEKPG-- 482

  Fly   179 NGCIMADEMGLGKTLQCVTLVWTLL----RQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGR 239
            :|||:|..||||||||.|||..|||    |.|      :::.:::||.|.|.||.:|||.|:.  
  Fly   483 SGCILAHCMGLGKTLQVVTLSHTLLVNTRRTG------VDRVLIISPLSTVNNWAREFTSWMK-- 539

  Fly   240 LLCLPMEGGTKENTIRA--LEQFSMTSARL----------GTPVLLISYETFRIYAEILCK---- 288
                    ....|.|..  :.::.....|:          |  |.::.|:.:||.|....|    
  Fly   540 --------FANRNDIEVYDISRYKDKPTRIFKLNEWFNEGG--VCILGYDMYRILANEKAKGLRK 594

  Fly   289 ----------YEVG--MVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVN 341
                      .:.|  :|:|||||.|||......:|:..::||||::|:|||:||:|.|||.::.
  Fly   595 KQREQLMQALVDPGPDLVVCDEGHLLKNEKTSISKAVTRMRTKRRIVLTGTPLQNNLREYYCMIQ 659

  Fly   342 FVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLP 406
            ||.|.:|||...:...|.:.|..||.|||||::.:....::..|..|::.||.||...:|..|||
  Fly   660 FVKPNLLGTYKEYMNRFVNPITNGQYTDSTERDLRLMKHRSHILHKLLEGCIQRRDYSVLAPYLP 724

  Fly   407 VKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHP-------- 463
            .|.|.|:...|:.:|.:||..::.:.: .:|..|...|.: ....|...|::|.:||        
  Fly   725 PKHEYVVYTTLSELQQKLYGYYMTTHR-EQSGGDVVGKGA-RLFQDFQDLRRIWTHPMNLRVNSD 787

  Fly   464 DLIYEKLTARE----KGF---ENSQNVLPSN---------------------------------- 487
            ::|.::|.:.:    :||   |..::...||                                  
  Fly   788 NVIAKRLLSNDDSDMEGFICDETDEDEAASNSSDSCETFKSDASMSGLAASSGKVKKRKTRNGNA 852

  Fly   488 -----------------------------YKP----KDL-NPELSGKFMLLDFMLAAIRAEGNDK 518
                                         :||    ::| |...|.|.::|..:|....|.| ||
  Fly   853 GGGDSDSDLEMLGGLGGGSSVQKDDPSEWWKPFVEERELNNVHHSPKLLILLRLLQQCEAIG-DK 916

  Fly   519 VVLISNYTQTLDLFEQL-----ARKRKYGF-----------------VRLDGTMSIKKRSKVVDR 561
            :::.|...|:||:.|..     :..:.|.|                 .||||:.|:::|..:..:
  Fly   917 LLVFSQSLQSLDVIEHFLSLVDSNTKNYEFEGDVGDFKGCWTSGKDYFRLDGSCSVEQREAMCKQ 981

  Fly   562 FND-PESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLV 625
            ||: ....:.||::|::|||.|:||:.|||:.:||..|||::|.|::.||:|.||.||||||||:
  Fly   982 FNNITNLRARLFLISTRAGGLGINLVAANRVVIFDVSWNPSHDTQSIFRVYRFGQIKPCYIYRLI 1046

  Fly   626 ASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQN 690
            |.|::|:|:.:||..|::.:..:|| .:...:|:.:.||.:|:::                    
  Fly  1047 AMGTMEQKVYERQVAKQATAKRVID-EQQISRHYNQTDLMELYSY-------------------- 1090

  Fly   691 IQMKPPPEDTDCTSHLSQWYHCSNNRGLP----DNILAQAWMDCKCVSFVFHHRSQAQEIVPSAE 751
             ::||                 |..|.:|    |.:.|:...:.:.:.|.:|......|     :
  Fly  1091 -ELKP-----------------STEREMPILPKDRLFAEILTEHEKLIFKYHEHDSLLE-----Q 1132

  Fly   752 EEATDQPEEKPES 764
            ||..:..||:.:|
  Fly  1133 EEHENLTEEERKS 1145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 SNF2_N 159..466 CDD:278600 115/353 (33%)
DEXDc 179..328 CDD:238005 57/180 (32%)
HELICc 493..622 CDD:238034 53/152 (35%)
XNPNP_651398.1 DTHCT 258..335 CDD:285332 15/76 (20%)
SNF2_N 458..779 CDD:278600 113/342 (33%)
DEXDc 483..646 CDD:238005 57/180 (32%)
Helicase_C 913..1035 CDD:278689 40/122 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467237
Domainoid 1 1.000 47 1.000 Domainoid score I705
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.840

Return to query results.
Submit another query.