DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment okr and rad54l

DIOPT Version :9

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_957438.1 Gene:rad54l / 394119 ZFINID:ZDB-GENE-040426-968 Length:738 Species:Danio rerio


Alignment Length:756 Identity:417/756 - (55%)
Similarity:549/756 - (72%) Gaps:33/756 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRRSLAPSQ-----RGPLRPESRHSFTPPLLKKNKRSCQQELEREQELD--RRRLGALRDASNTS 58
            |||||||||     :|| ..:....:.|.:..::||.|     ||:.:.  |:.|..|.:.    
Zfish     1 MRRSLAPSQVAKRKQGP-DSDDEEDWEPDMEPQSKRDC-----REKYISPYRKPLTPLTNR---- 55

  Fly    59 ELPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYG--GKRVLGVRRCISRRPLHDPMACNAL 121
                |:....| |:|..|.|:|::.||:|:.||.   |  |.|.||:||...|:.||||....||
Zfish    56 ----PVCADGN-EHEAFIRKILSKPFKIPIPNYT---GVLGLRALGLRRAGVRKALHDPFEDGAL 112

  Fly   122 VLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-GNFNGCIMAD 185
            ||:.|||.:.|:.:..|..|:.|||||||:||.:|||||||||:|:::||.|:| .|..||||||
Zfish   113 VLYEPPAISAHDLIKADKEKLPVHVVVDPVLSKVLRPHQREGVKFLWDCVTGRRIENSYGCIMAD 177

  Fly   186 EMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTK 250
            ||||||||||:||:||||:|.|:|||.|:|.|||||||||:||..|..|||.||:..:.::||:|
Zfish   178 EMGLGKTLQCITLIWTLLKQSPDCKPEIDKVIVVSPSSLVRNWYNEVGKWLGGRVQPVAIDGGSK 242

  Fly   251 ENTIRALEQF-SMTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALM 314
            :.....|..| |....|:.||:|:|||||||::||:|.|.:||:||||||||||||||.||.||.
Zfish   243 DEIDSKLVNFISQQGMRIPTPILIISYETFRLHAEVLHKGKVGLVICDEGHRLKNSDNQTYLALN 307

  Fly   315 GLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAI 379
            .:..:||||:|||||||||.||:|||:|||..:||||..||:.||..||:|::.|:::::|....
Zfish   308 SMNAQRRVLISGTPIQNDLLEYFSLVHFVNSGILGTAQEFKKRFEIPILKGRDADASDKDRAAGE 372

  Fly   380 EKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEK 444
            :|.||||.:|::|:||||:.||:||||||.|.|:|..||.:|.|||..|||..:...||.  ..|
Zfish   373 QKLQELISIVNRCLIRRTSDILSKYLPVKIEQVVCCNLTPLQKELYKLFLKQAKPVESLQ--TGK 435

  Fly   445 ASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLA 509
            .|:::|:.||:|||:|:||.|||||....|:||:.:.::.|.||..|.:.|:||||.::||::||
Zfish   436 ISVSSLSSITSLKKLCNHPALIYEKCLTGEEGFDGALDLFPQNYSTKAVEPQLSGKMLVLDYILA 500

  Fly   510 AIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFML 574
            ..|...:|||||:|||||||||||:|.|.|:|.:||||||||||||:|:|:|||:|.|..|:|||
Zfish   501 MTRTTTSDKVVLVSNYTQTLDLFEKLCRNRRYLYVRLDGTMSIKKRAKIVERFNNPSSPEFIFML 565

  Fly   575 SSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQT 639
            |||||||||||||||||.|||||||||||||||||||||||||.||||||:::|:|||||||||.
Zfish   566 SSKAGGCGLNLIGANRLVMFDPDWNPANDEQAMARVWRDGQKKTCYIYRLLSTGTIEEKILQRQA 630

  Fly   640 HKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTS 704
            |||:|||.::|..:..|:||:..:|::||:.:...||||||:.:|:|||...|::|||:|:|||.
Zfish   631 HKKALSSCVVDEEQDVERHFSLGELRELFSLNEKTLSDTHDRFRCRRCVNGRQVRPPPDDSDCTC 695

  Fly   705 HLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQE 745
            .||.|:||::.|||.|.:|..:| |. .||||||.||...:
Zfish   696 DLSNWHHCADKRGLRDPVLQASW-DA-AVSFVFHQRSHEDQ 734

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 SNF2_N 159..466 CDD:278600 177/308 (57%)
DEXDc 179..328 CDD:238005 93/149 (62%)
HELICc 493..622 CDD:238034 97/128 (76%)
rad54lNP_957438.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..31 12/30 (40%)
Rad54_N <71..>117 CDD:285821 22/48 (46%)
SNF2_N 150..457 CDD:278600 177/308 (57%)
DEXDc 172..321 CDD:238005 93/148 (63%)
DEAH box. /evidence=ECO:0000255|PROSITE-ProRule:PRU00541 290..293 2/2 (100%)
HELICc 484..613 CDD:238034 97/128 (76%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170579954
Domainoid 1 1.000 335 1.000 Domainoid score I1099
eggNOG 1 0.900 - - E2759_KOG0390
Hieranoid 1 1.000 - -
Homologene 1 1.000 - - H48227
Inparanoid 1 1.050 815 1.000 Inparanoid score I464
OMA 1 1.010 - - QHG58624
OrthoDB 1 1.010 - - D93727at2759
OrthoFinder 1 1.000 - - FOG0001533
OrthoInspector 1 1.000 - - oto39915
orthoMCL 1 0.900 - - OOG6_102456
Panther 1 1.100 - - LDO PTHR45629
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1064
SonicParanoid 1 1.000 - - X3107
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
1615.800

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