Protein Alignment okr and Rad54l2

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_001127992.2
• Gene: Rad54l2 / 363135
• RGDID: 1561889
• Length: 1466
• Species: Rattus norvegicus
• Alignment Length: 977
• Identity: 265/977 - (27%)
• Similarity: 424/977 - (43%)
• Gaps: 292/977 - (29%)

  Fly    15 PESRHSFTPPLLKKN--------------KRSCQQELEREQELDRRRLG---------------- 49
            |:.:.:..|..:::|              |.:.|:||||.:.|:::|..
  Rat    97 PKKKRAQKPSHMRRNIRKLLREDQLEPVTKAAQQEELERRKRLEQQRKEYAAPIPTVPLEFLPEE 161

  Fly    50 -ALRDASNTSELP--------LPIRFTANSE---------YELAIAK-----VLARKFKVPMDNY 91
             .|| ||:..:||        :.:..::.||         .||:..:     ::.....|..::.
  Rat   162 IVLR-ASDGPQLPPRVLAQEVICLDSSSGSEDEKSSRDEVIELSSGEEDTLHIVDSSESVSEEDE 225

  Fly    92 VPDYGGKRVLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNIL 156
            ..:.||..   |...:::   ||.:....:.|.|||   |.|           :|.:.|.|:..:
  Rat   226 EEEKGGTH---VNDALNQ---HDALGRVLVNLNHPP---EEE-----------NVFLAPQLARAV 270

  Fly   157 RPHQREGVRFMYE-CVEG----KRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKA 216
            :|||..|:||:|: .||.    |..:..|||:|..||||||||.::.:..|.|..|     ....
  Rat   271 KPHQIGGIRFLYDNLVESLERFKTSSGFGCILAHSMGLGKTLQVISFIDVLFRHTP-----AKTV 330

  Fly   217 IVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRAL-------EQFSMTS-ARLGTP--- 270
            :.:.|.:.::||..||..||... ..||.:...:|...|..       |..::.| |::.|.
  Rat   331 LAIVPVNTLQNWLAEFNMWLPAP-EALPADSKPEEIQPRFFKVHILNDEHKTVASRAKVTTDWVS 394

  Fly   271 ---VLLISYETFRI--------------------------------------YAEILCKYEVGMV 294
               |||:.||.:|:                                      :.:.||:....:|
  Rat   395 EGGVLLMGYEMYRLLTLKKSLATGRPKKTKKRSHPVIIDLDEEDRQQEFRREFEKALCRPGPDVV 459

  Fly   295 ICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFE 359
            |||||||:||....|.|||..::::|||:|:|.|:||:|.||:.:|:||.|:.|||...|...||
  Rat   460 ICDEGHRIKNCQASTSQALKNIRSRRRVVLTGYPLQNNLIEYWCMVDFVRPDFLGTRQEFSNMFE 524

  Fly   360 SAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLEL 424
            ..||.||..|||.|:.:....::..|..|::..:.||.:.:|..:||.|.|.||..:|:.||.:|
  Rat   525 RPILNGQCIDSTPQDVRLMRYRSHVLHSLLEGFVQRRGHTVLKIHLPAKEENVILVRLSQIQRDL 589

  Fly   425 YTNFLKSDQVRRSLADCNEKA--SLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNV---- 483
            ||.|:  |:.|    ||....  .|..|.......||.:|||::||.|  :::...|.|::
  Rat   590 YTQFM--DRFR----DCGSSGWLGLNPLKAFCVCCKIWNHPDVLYEAL--QKENLANEQDLDVEE 646

  Fly   484 -----------------------LPSN--------------YKP--------------KDLNP-- 495
                                   |||:              :.|              |||..
  Rat   647 LGSAGTSTRCPPHGTKVKGEDSALPSSMGEATNSKFLQGVGFNPFQERGNNIVTYEWAKDLLTNY 711

  Fly   496 -----ELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARK----------------- 538
                 |.|.|.:|| |.|.....:..||:::.|....||.|.|:...|
  Rat   712 QTGVLENSPKMVLL-FHLIEESVKLGDKILVFSQSLSTLALIEEFLGKRDMPCPPGAEGQGAQKW 775

  Fly   539 -RKYGFVRLDGTMSIKKRSKVVDRFNDPES-DSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPA 601
             |...:.||||:....:|.:::::||||.: .::||:||::||..|:|||||||:.:||..|||.
  Rat   776 VRNVSYFRLDGSTPAFERERLINQFNDPSNLTTWLFLLSTRAGCLGVNLIGANRVVVFDASWNPC 840

  Fly   602 NDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKD 666
            :|.||:.||:|.|||||||||||||..::|:||..||..|:.:|..::| :.:...:|||.::::
  Rat   841 HDAQAVCRVYRYGQKKPCYIYRLVADYTLEKKIYDRQISKQGMSDRVVD-DLNPMLNFTRKEVEN 904

  Fly   667 LFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHCSNNRGLPDNILAQAWMDCK 731
            |..|                    ::.:|.|:.:            .:.:|:.:::|..|
  Rat   905 LLHF--------------------VEKEPAPQTS------------LDIKGIKESVLQLA----- 932

  Fly   732 CVSF-------VFHHRS----QAQEIVPSAEEEATDQPEEKPESRKRSST-----------PASD 774
            |:.:       .|.|.|    :....:..||::|.   ::..|..||:|.           ||||
  Rat   933 CLKYPHLITKEPFEHESLLLNRKDHKLTKAEKKAA---KKSYEEDKRTSVPYTRPSYAQYYPASD 994

  Fly   775 DS 776
            .|
  Rat   995 QS 996

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137	7/54 (13%)
		HepA	<156..650	CDD:440319	202/633 (32%)
		DEXHc_RAD54A	156..396	CDD:350825	93/296 (31%)
Rad54l2	NP_001127992.2	HepA	109..889	CDD:440319	236/815 (29%)
		DEXHc_ARIP4	270..546	CDD:350827	91/281 (32%)
		PHA03247	<1111..1429	CDD:223021