DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and Marcal1

DIOPT Version :9

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_608883.1 Gene:Marcal1 / 33709 FlyBaseID:FBgn0031655 Length:755 Species:Drosophila melanogaster


Alignment Length:804 Identity:168/804 - (20%)
Similarity:275/804 - (34%) Gaps:264/804 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 SQRGPLRPESRHSFTPPLLKKNKRSCQQELER--EQELDRRRLGALRD-----ASNTSELPLPI- 64
            ::.||...:::.|.....||..|::..:||.|  .....|...|..|:     .|:..|.|:.: 
  Fly    79 NRSGPTPGDNKSSSFLNALKAIKQTSNRELSRGAAHPYQRPNGGNERNKPTLSLSSDKEKPVAVL 143

  Fly    65 ---------------RFTA-NSEYELAIAKVLARKFK-VPMDNY----------VPDYGGKRVLG 102
                           ||.| .|.|...:..|    || :|...|          :.||...:.  
  Fly   144 LGNSITCNLYLISTHRFAAQTSGYHEQLVTV----FKNMPTKCYDGQTRIWSFDLSDYQSLKT-- 202

  Fly   103 VRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVL-------------VHVVVDPLLSN 154
                                  |......:..|...|.|||             |...::|.|::
  Fly   203 ----------------------HAADLKPYVHMNGIPKKVLDLCGQPPVVPERSVLASIEPKLAD 245

  Fly   155 ILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLV------WTLLRQGPECKPTI 213
            .|.|.|::||.|..    .::|....|   ||||||||.|.:.:.      |.||          
  Fly   246 QLMPFQQDGVCFAI----AQKGRIMIC---DEMGLGKTYQALAVADYFKDDWPLL---------- 293

  Fly   214 NKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLG-TPVLLISYE 277
                |.:.:|...:|.|.....|             .:..|..::..:.....:| ..||:.||.
  Fly   294 ----VCTTASTRDSWAKHIMDLL-------------PKVPIHYVQVLNNNQLYVGEAKVLITSYN 341

  Fly   278 TFRIYAEILCKYEVGMVICDEGHRLKNS--------DNLTYQALMGLKTKRRVLLSGTPIQNDLT 334
            ....:.:.|.:.:.|.:|.||.|.||||        ..||.||      ||.|||||||..:...
  Fly   342 MMERHEDKLMQRKFGFIIFDESHTLKNSKAKCTTTAKRLTDQA------KRVVLLSGTPALSRPL 400

  Fly   335 EYYSLVNFVNPEMLGTAAVFKRNFESAILR----GQNTDSTEQERQRAIEKTQELIGLVDQCIIR 395
            |.::.:..::.:.:        ||.....|    .|:|...:...|..:|:.:.::.|  :.::|
  Fly   401 ELFTQLQMIDGKFM--------NFMEFTTRYCDGKQSTFGWDANGQSNLEELKVILHL--KYMLR 455

  Fly   396 RTN-QILTKYLPVKFEMVICAKL-------TAIQLELYTNFLKSDQVRRSLADCNEKASL---TA 449
            ||. ::|.:......|.|:....       |...|:.:...||:.:.|     ..|:..|   ..
  Fly   456 RTKVEVLPQLAEKNRETVVLDPALVWTNAETKETLDAFNKELKTAKGR-----ATEEILLRFYAR 515

  Fly   450 LADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAE 514
            .|::.| :.:|:     |.|...:|:                                       
  Fly   516 TAEVKT-RAVCA-----YLKTLVKEQ--------------------------------------- 535

  Fly   515 GNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAG 579
              .|.::.:::...:|.........|..::|:||......||..||.| ..:|...:.:||.||.
  Fly   536 --KKFIIFAHHRVMMDAISDFLSGLKVHYIRIDGQTRSDHRSDSVDTF-QKKSSCKVALLSLKAC 597

  Fly   580 GCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKI---------- 634
            ..|:.|..|..:...:.||||:...||.:|..|.||.||.....|:|..:.::.|          
  Fly   598 NSGITLTAAEIIVFAELDWNPSTLAQAESRAHRIGQTKPVICRYLIAHNTADDIIWNMLKNKQEV 662

  Fly   635 ----------LQRQTHKKSLSSTIIDNNESAEKHFT----------RDDLKDLFTFDANILSDTH 679
                      ||:.||..:.:|     :...|::|:          |:.:|..|:          
  Fly   663 LSKVGIFAENLQKATHTAAPTS-----SHKIEEYFSPSTSTSLEPERNSIKQYFS---------- 712

  Fly   680 DKLKCKRCVQNIQMKPPPEDTDCT 703
                      .|..|.|||..:.|
  Fly   713 ----------TIPAKEPPEQNNNT 726

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 SNF2_N 159..466 CDD:278600 77/336 (23%)
DEXDc 179..328 CDD:238005 45/163 (28%)
HELICc 493..622 CDD:238034 31/128 (24%)
Marcal1NP_608883.1 HARP 160..215 CDD:284784 13/82 (16%)
DEXDc 239..420 CDD:214692 59/228 (26%)
DEXDc 265..394 CDD:238005 45/164 (27%)
Helicase_C 518..632 CDD:278689 32/161 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45467243
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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