DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and Chd7

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001264078.1 Gene:Chd7 / 320790 MGIID:2444748 Length:2986 Species:Mus musculus


Alignment Length:575 Identity:168/575 - (29%)
Similarity:282/575 - (49%) Gaps:88/575 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 SNILRPHQREGVRFM----YECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTI 213
            :|.||.:|.|||.::    |        |...||:|||||||||:|.:|.::.:..:|..     
Mouse   955 NNKLREYQLEGVNWLLFNWY--------NMRNCILADEMGLGKTIQSITFLYEIYLKGIH----- 1006

  Fly   214 NKAIVVSPSSLVKNWEKEFTKW-------LHGRLLCLPMEGGTKENTIRALEQ-FSMTSARLGTP 270
            ...:|::|.|.:.|||:||..|       .||        ......||:..|. |.....|    
Mouse  1007 GPFLVIAPLSTIPNWEREFRTWTELNVVVYHG--------SQASRRTIQLYEMYFKDPQGR---- 1059

  Fly   271 VLLISYETFRIYAEILCKYEVGM-------------VICDEGHRLKNSDNLTYQALMGLKTKRRV 322
            |:..||:    :..|:..:|:.:             |:.||.|||||.:....:.|..:..:.:|
Mouse  1060 VIKGSYK----FHAIITTFEMILTDCPELRNIPWRCVVIDEAHRLKNRNCKLLEGLKMMDLEHKV 1120

  Fly   323 LLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIG 387
            ||:|||:||.:.|.:||::|:.|....:...|.:.|...        .||       |:.|:|..
Mouse  1121 LLTGTPLQNTVEELFSLLHFLEPSRFPSETTFMQEFGDL--------KTE-------EQVQKLQA 1170

  Fly   388 LVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALAD 452
            ::...::||..:.:.|.|..|.|.:|..:||.||.:.|...|:.:..  .|:....:|::..|.:
Mouse  1171 ILKPMMLRRLKEDVEKNLAPKEETIIEVELTNIQKKYYRAILEKNFT--FLSKGGGQANVPNLLN 1233

  Fly   453 -ITTLKKICSHPDLI---YEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRA 513
             :..|:|.|:||.||   .||:.   :.|:.:.|....:::.:.: .:.:||.:|:|.:|..::|
Mouse  1234 TMMELRKCCNHPYLINGAEEKIL---EEFKETHNAESPDFQLQAM-IQAAGKLVLIDKLLPKLKA 1294

  Fly   514 EGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKA 578
             |..:|::.|...:.||:.|....:|:|.:.|:||.:....|...:|||:.|:||.|:|:|.::|
Mouse  1295 -GGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRA 1358

  Fly   579 GGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKS 643
            ||.|:||..|:...:||.||||.||.||.||..|.||.|...||||:...|.|.::..:.:.|..
Mouse  1359 GGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYRLITRNSYEREMFDKASLKLG 1423

  Fly   644 LSSTII------DNNESAEKHFTRDDLKDLFTFDA-NILSDTHDKLKCKRCVQNI 691
            |...::      :|..:..:..::.:::||....| ..|.|..|: ..|.|.::|
Mouse  1424 LDKAVLQSMSGRENATNGVQQLSKKEIEDLLRKGAYGALMDEEDE-GSKFCEEDI 1477

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137
HepA <156..650 CDD:440319 157/528 (30%)
DEXHc_RAD54A 156..396 CDD:350825 72/264 (27%)
Chd7NP_001264078.1 Glutenin_hmw <23..553 CDD:367362
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 93..146
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 159..180
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 194..246
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 261..307
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 372..412
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 461..792
CD1_tandem_CHD5-9_like 786..850 CDD:349315
CD2_tandem_CHD5-9_like 869..926 CDD:349310
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 928..949
PLN03142 957..>1556 CDD:215601 167/573 (29%)
DEAH box 1095..1098 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1566..1590
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1826..1851
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2151..2274
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2366..2393
BRK 2552..2593 CDD:462196
BRK 2631..2675 CDD:197800
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2812..2861
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2924..2986
Blue background indicates that the domain is not in the aligned region.

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