DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and RAD54B

DIOPT Version :9

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_036547.1 Gene:RAD54B / 25788 HGNCID:17228 Length:910 Species:Homo sapiens


Alignment Length:700 Identity:278/700 - (39%)
Similarity:400/700 - (57%) Gaps:60/700 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 LARK-FKVPMDNYV-PDYGGKRVLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKV 142
            :||| |..|..:.. |.....|....:.|   :|.|||...|:||:..|.  ..|:.:.......
Human   223 VARKCFSNPFKSVCKPSSKENRQNDFQNC---KPRHDPYTPNSLVMPRPD--KNHQWVFNKNCFP 282

  Fly   143 LVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFN-GCIMADEMGLGKTLQCVTLVWTLLRQG 206
            ||.||:||.|...|||||:||:.|:||||.|.|.|.. |.|:||||||||||||::|:|||..||
Human   283 LVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTLQCISLIWTLQCQG 347

  Fly   207 P-ECKPTINKAIVVSPSSLVKNWEKEFTKWLHG-RLLCLPMEGGTKENTIRALEQFSMTSARLGT 269
            | ..||.|.|.::|:|.|||.||:|||.|||.. |:....::...|      :|:|..:   :..
Human   348 PYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDHK------VEEFIKS---IFY 403

  Fly   270 PVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLT 334
            .||:||||......:.:...:..::|||||||||||...|..||:.|..::|::|:||||||||.
Human   404 SVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISLSCEKRIILTGTPIQNDLQ 468

  Fly   335 EYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQ 399
            |:::|::||||.:||:.:.:::.:|..|:..:...::|:|::....:..||..|....|:|||.:
Human   469 EFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEEKELGERRAAELTCLTGLFILRRTQE 533

  Fly   400 ILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPD 464
            |:.||||.|.|.|:..:..|:|:|||...|.|..||..|....|.:  ..|..|..|||:|:||.
Human   534 IINKYLPPKIENVVFCRPGALQIELYRKLLNSQVVRFCLQGLLENS--PHLICIGALKKLCNHPC 596

  Fly   465 LIYEKLTAREKGFENSQNVLPSNYK------PKDLNPEL-----SGKFMLLDFMLAAI-RAEGND 517
            |::..:..:|......:|...|.||      |.|.||.|     |||..:|..:||.| .....:
Human   597 LLFNSIKEKECSSTCDKNEEKSLYKGLLSVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTE 661

  Fly   518 KVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCG 582
            ||||:|||||||::.:::.::..|.:.||||...|.:|.::||.||...|..|:|:|||||||.|
Human   662 KVVLVSNYTQTLNILQEVCKRHGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVG 726

  Fly   583 LNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSST 647
            |||||.:.|.::|.|||||.|.|||:||||||||.|.:||||:.:|:|||||.|||..|:.|...
Human   727 LNLIGGSHLILYDIDWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGA 791

  Fly   648 IIDNNESAEK-HFTRDDLKDLFTFDANILSDTHDKLKCKRCV----------------QNIQMKP 695
            ::|..:::|. .|:.::||:|||...:....|||.|.|: |.                ::.|:.|
Human   792 VVDLTKTSEHIQFSVEELKNLFTLHESSDCVTHDLLDCE-CTGEEVHTGDSLEKFIVSRDCQLGP 855

  Fly   696 PPEDTD-----CTSHLSQWYHCSNNR-GLPDNILAQAWMDCKCVSFVFHH 739
            ..:.::     ..|.|.||.|.|.:. .|.|..|.:.   .:.|||:|.:
Human   856 HHQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERI---TENVSFIFQN 902

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 SNF2_N 159..466 CDD:278600 131/309 (42%)
DEXDc 179..328 CDD:238005 66/151 (44%)
HELICc 493..622 CDD:238034 68/134 (51%)
RAD54BNP_036547.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..33
HepA <296..815 CDD:223627 232/529 (44%)
DEGH box 431..434 2/2 (100%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0390
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D93727at2759
OrthoFinder 1 1.000 - - FOG0001533
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.820

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