DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and csb-1

DIOPT Version :9

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_510607.2 Gene:csb-1 / 181674 WormBaseID:WBGene00000803 Length:957 Species:Caenorhabditis elegans


Alignment Length:694 Identity:196/694 - (28%)
Similarity:310/694 - (44%) Gaps:117/694 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 PLRPESRHSFTPPLLKKNKRSCQQELEREQELD----------RRRLGALRDASNTSELPLPIRF 66
            |:..:||        ||::||...|....:|.|          .|:.|....:|:.|.....|..
 Worm    75 PISSKSR--------KKSRRSDSSEFVPSEESDDDEEYEVLEKSRKKGRKSGSSSRSSSDDFIES 131

  Fly    67 TANSEYELA--IAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLFHPPAY 129
            ..|.:|:.|  :....::.||..:|...|: ....::..|...|                     
 Worm   132 DDNEDYKSAGLLDDNDSKNFKARIDKLKPE-ATSELVDTRMVTS--------------------- 174

  Fly   130 TEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKTLQ 194
             |.......|.||...|      .|.|...|:|||    |.::.|..:.:|.|:|||||||||:|
 Worm   175 -EEYGKSSKPWKVNAGV------WNKLHKFQQEGV----EWLQKKTDHRSGGILADEMGLGKTIQ 228

  Fly   195 CVTLVWTLLRQGPECKPT------INKAIVVSPSSLVKNWEKEFTKW--------LHGRLLCLPM 245
            .|    ..||...|...|      ::.|::|...|::..|.||..:|        ||..  |   
 Worm   229 SV----VFLRSIQETARTHYKTTGLDTALIVCHVSIIAQWIKELNQWFPKARVFLLHSH--C--- 284

  Fly   246 EGGTKENTIRALEQFSMTSARLGTP---VLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDN 307
            ..|.:|:.:.::.: .:...|...|   ::|.:|..|....:.:.|:...:||.||||.::|.:.
 Worm   285 STGRQEDYVGSIFR-KLQRRRKEYPDGAIILTTYSLFTKLKKPIVKHLWQVVILDEGHYIRNENT 348

  Fly   308 LTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTE 372
            ....|:..|.|.:|.:|:|||.||.|:|::.||:||:|..|..:|.|.|||...|..|.|.:.:.
 Worm   349 KCSIAMRKLMTTQRFILTGTPFQNRLSEFWKLVDFVHPGRLSDSATFHRNFTHIINAGANLNCSP 413

  Fly   373 QERQRAIEKTQELIGLVDQCIIRRT----NQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQ 433
            :...:|.|....|...|...|:||.    .::|  .||.|.|:|:..:|:..|..||..:..|.|
 Worm   414 EAAAKAYECLVALHIAVKPLILRRLQEDHKEVL--QLPEKQEIVLSCELSKRQRRLYMEYGNSHQ 476

  Fly   434 VRRSLADCNEKASLTALADITTLKKICSHPDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELS 498
            |...:     :..|.|...|..|..||:||. ||..|:.....|.:.::               |
 Worm   477 VNEII-----ERRLKAFVGINHLTNICNHPG-IYRSLSPASPKFGSIKD---------------S 520

  Fly   499 GK----FMLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVV 559
            ||    |.|.|....:    ..::|:|.:.....:.:.|....::....|.|.|..|...|.|::
 Worm   521 GKVEMTFKLFDDWFKS----PTNRVILFTQRRTVITMMEYFLAEKGIKCVSLTGADSAAARPKII 581

  Fly   560 DRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRL 624
            .:|.|..|.. :|:::::|||.||||..||::.:|||||||..|.||..|::|.||.....||||
 Worm   582 KKFEDDVSIK-VFLMTTRAGGLGLNLTCANKVIIFDPDWNPQADNQAKNRIYRMGQTNDVAIYRL 645

  Fly   625 VASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLF 668
            |::|:||:....:|..|::|::.::.|.| .::....:.|.|||
 Worm   646 VSNGTIEDLKFFKQVQKENLAARLLHNAE-IDQFVPNNTLADLF 688

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 SNF2_N 159..466 CDD:278600 102/327 (31%)
DEXDc 179..328 CDD:238005 48/165 (29%)
HELICc 493..622 CDD:238034 42/132 (32%)
csb-1NP_510607.2 SNF2_N 197..503 CDD:278600 102/327 (31%)
DEXDc 213..369 CDD:238005 48/165 (29%)
Helicase_C 520..635 CDD:278689 40/119 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.910

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