Protein Alignment okr and rad-54.L2

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_501545.1
• Gene: rad-54.L2 / 177706
• WormBaseID: WBGene00007761
• Length: 1274
• Species: Caenorhabditis elegans
• Alignment Length: 818
• Identity: 199/818 - (24%)
• Similarity: 330/818 - (40%)
• Gaps: 253/818 - (30%)

  Fly   152 LSNILRPHQREGVRFMYECV-----EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKP 211
            |:::|:|||..|:||||:..     |.|:.:..|||:|..||||||:|.:|.....||     ..
 Worm   252 LTHVLQPHQLGGIRFMYDNTIESLGEYKKSDGFGCILAHSMGLGKTIQVITFSEIFLR-----AT 311

  Fly   212 TINKAIVVSPSSLVKNWEKEFTKWL------HGRLLCLP---MEGGTK--ENTIRALEQFSMTSA 265
            ...|.:|:.|.:.::||..|:.||:      ..|:....   :..|.|  :..:..:||:..|..
 Worm   312 KAKKVLVIVPINTIQNWYSEYDKWIPKFSDTGDRIRSFEVFLLGDGVKTFDQRVNLIEQWDQTGG 376

  Fly   266 RLGTPVLLISYETFRIYAEIL-----------------------------------CKYEVG--- 292
                 |:|:.|:.||:..::.                                   .::|.|
 Worm   377 -----VMLVGYDMFRLLIKMTLPKKQKKGRPKLNLSGISSGFSKDSSEDQKLRDEELEFETGFTS 436

  Fly   293 ----------------------MVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTE 335
                                  :|:|||||::||........|..:.||||::|:|.|:||:|.|
 Worm   437 GGRVRQEAYSLIRSALLEPGPDLVVCDEGHKIKNITAEISMTLGAINTKRRIVLTGYPLQNNLLE 501

  Fly   336 YYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQI 400
            |:.:::||.|:.|||...|...||..|..||..||:..:.:.|:::|..|:.||...:.|||:.:
 Worm   502 YFCMIDFVRPKYLGTRKSFIDRFEKPIKNGQCVDSSPDDVKIALQRTHVLVELVKGFVQRRTHHL 566

  Fly   401 LTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTLKKICSHPDL 465
            |.|.||...|.|:..:.:.||.:||.||:.  ..:..:| .|..|....|...:...||.:|||:
 Worm   567 LKKILPESKEYVLLLRKSQIQRQLYRNFVL--WAKNEIA-ANNDAVFNPLMAFSACSKIWNHPDI 628

  Fly   466 IYEKLTAREKGFENSQNV----------------------------------------------- 483
            :|..:..:::..|:.:.|
 Worm   629 LYRLVEQKKRAEEDKKRVEQMKFAQLQQQQQQQQQQLQGMMMMGNNGMMPGFGAQFHPQQNGMMM 693

  Fly   484 -----LPSNYK-PKDLN-----------------------PELSGK------------------- 500
                 .|:||: |...|                       |..|.|
 Worm   694 QNGSWHPNNYQMPSPFNSIPSNPSTPTSSSTSKSAKKTKKPRGSKKAPKSDEEDEEVEKESRMKY 758

  Fly   501 ---FMLLDFMLAAIRAEG----------------NDKVVLISNYTQTLDLFEQLARKRKY----- 541
               |.|.:.....:...|                .:|:::.|.....||:.|::.:||:.
 Worm   759 DWTFELFEKYQEGVLENGYKIVISLEILDESTQIGEKILIFSQNLTALDMLEEILKKRQIRGKDG 823

  Fly   542 ---------GFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLFMFDPD 597
                     .::|||||.|...|.|:::|||. |....||::|::||..|:||:.|||..:.|..
 Worm   824 PGQRWEKNRNYLRLDGTTSGADREKLINRFNS-EPGLSLFLISTRAGSLGINLVSANRCIIIDAC 887

  Fly   598 WNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEKHFTRD 662
            |||.:|.||:.||:|.||:|..::|||:...|:|..|..||..|..|...::|:.: .:.:.::.
 Worm   888 WNPCHDAQAVCRVYRYGQQKKTFVYRLIMDNSMERSIFNRQISKHGLQQRVVDDAQ-VDANISQK 951

  Fly   663 DLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHCSNNRGLPDNILAQAW 727
            :|:.|..:| ......|||..    ..:.....|..|: .|..:||.:     .|.|
 Worm   952 ELETLLMYD-EAQDVNHDKWN----TDDWDFGDPVLDS-ITKRMSQMF-----AGKP-------- 997

  Fly   728 MDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEEKPESR 765
                     |.|    :.::..:|:..::|  ||.|::
 Worm   998 ---------FLH----ETLIMESEQSLSEQ--EKREAQ 1020

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137
		HepA	<156..650	CDD:440319	177/697 (25%)
		DEXHc_RAD54A	156..396	CDD:350825	86/315 (27%)
rad-54.L2	NP_501545.1	HepA	60..940	CDD:440319	178/701 (25%)
		DEXHc_ARIP4	256..547	CDD:350827	82/300 (27%)