Protein Alignment okr and smrd-1

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: NP_499301.2
• Gene: smrd-1 / 176462
• WormBaseID: WBGene00010845
• Length: 989
• Species: Caenorhabditis elegans
• Alignment Length: 374
• Identity: 79/374 - (21%)
• Similarity: 138/374 - (36%)
• Gaps: 106/374 - (28%)

  Fly   590 NGAGSSGQNSL----VNPEDVRALKQLDSLQSIGDSSGYESLNV----FSQTSNDLVAPGTMPQE 646
            ||.|...::.|    |...|:.:..:..||||.|:|:..:..|:    .|:.|..||||..
 Worm    27 NGNGLDEKDELGSKRVKVPDLASDAKTSSLQSHGNSNSVQQPNLSSEKLSKVSKVLVAPDA---- 87

  Fly   647 PQLKQQQQRIDAWKVSSVREEPIGDLDLSEDLFAQGTVSLGPFLTAIWGKLQTFTSNCLYVNLHL 711
                :..:|:       |||..:    ||:|:....||....:|..  .|..:...|...||...
 Worm    88 ----EGIRRV-------VRENDV----LSKDIKPSSTVETRTYLPK--AKSISTDDNRRVVNSGK 135

  Fly   712 TGLITHLTL----FPLPLLHSI-LLRPDIPTTSDTPSFHQVLKILKQQIDAELPDTDESLEIVDM 771
            ..|:.:.|:    ....::.:| ||:|...|.|          ::.|:..|| |..  |:.:.|.
 Worm   136 QALLENHTVKTDDSKCRVVKNISLLKPRETTES----------VVSQRGAAE-PSV--SVPVGDK 187

  Fly   772 ARSFLV-----------DREFRLVNMRKNAIESAASGKLLNGGGSSMTSSLSQTTPMQLTPSSSY 825
            ...|.:           |...|...|::|..   .||.|   ||.:..:|...|||::: |:...
 Worm   188 VSPFQMCSSADGSLGESDSMRRWREMKRNGF---LSGPL---GGVAAPTSTVVTTPVEV-PAPKQ 245

  Fly   826 DPFKRQDG-----------KRKSISNSFSNIFRRPGSVGKNPPSFPS----------------RS 863
            ...||:.|           |.:.:.:.|:|:....|.:.:..|...:                ||
 Worm   246 QKNKRRGGESLKKKNDVPKKEQQLVDRFANVTAPSGLLTELNPGIINHVRTKKQVCSIIEALIRS 310

  Fly   864 SNSNGLNHSPNGRQQPQSYTPASMNVPSPVGQQQHQHQSVSSVMPPSGL 912
            ||.:......:|          ..||...:    .:.::::..:|.:|:
 Worm   311 SNDDATTRERHG----------DFNVRDAI----REDRALAFKLPSTGV 345

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137
		HepA	<156..650	CDD:440319	19/67 (28%)
		DEXHc_RAD54A	156..396	CDD:350825
smrd-1	NP_499301.2	HepA	<393..902	CDD:440319