Protein Alignment okr and Smarca4

DIOPT Version :10

• Sequence 1: NP_476661.1
• Gene: okr / 33507
• FlyBaseID: FBgn0002989
• Length: 784
• Species: Drosophila melanogaster
• Sequence 2: XP_063120900.1
• Gene: Smarca4 / 171379
• RGDID: 621728
• Length: 1650
• Species: Rattus norvegicus
• Alignment Length: 756
• Identity: 204/756 - (26%)
• Similarity: 332/756 - (43%)
• Gaps: 147/756 - (19%)

  Fly    34 QQELEREQELDRRRLGALRDASNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGK 98
            ::|.|.|:|..:.............::|.|     :|:   .:::|.||..   ::|...|...:
  Rat   664 EEEEEEEEEQPQPAQPPTLPVEEKKKIPDP-----DSD---DVSEVDARHI---IENAKQDVDDE 717

  Fly    99 RVLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREG 163
              .||.:.::|          .|..::..|:...||  :|....|       :::.:|:.:|.:|
  Rat   718 --YGVSQALAR----------GLQSYYAVAHAVTER--VDKQSAL-------MVNGVLKQYQIKG 761

  Fly   164 VRFMYECVEGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNW 228
            :.::   |.....|.|| |:|||||||||:|.:.|:..|:    |.|......:::.|.|.:.||
  Rat   762 LEWL---VSLYNNNLNG-ILADEMGLGKTIQTIALITYLM----EHKRINGPFLIIVPLSTLSNW 818

  Fly   229 EKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGTP--------VLLISYETF----RI 281
            ..||.||              ..:.::...:.|..:.|...|        |||.:||..    .|
  Rat   819 AYEFDKW--------------APSVVKVSYKGSPAARRAFVPQLRSGKFNVLLTTYEYIIKDKHI 869

  Fly   282 YAEILCKYEVGMVICDEGHRLKNSD-------NLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSL 339
            .|:|..||    :|.|||||:||..       |..|.|      .||:||:|||:||.|.|.::|
  Rat   870 LAKIRWKY----MIVDEGHRMKNHHCKLTQVLNTHYVA------PRRLLLTGTPLQNKLPELWAL 924

  Fly   340 VNFVNPEMLGTAAVFKRNFESAI-LRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTNQILTK 403
            :||:.|.:..:.:.|::.|.:.. :.|:..|..|:|....|.:..:::   ...::||..:.:..
  Rat   925 LNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNEEETILIIRRLHKVL---RPFLLRRLKKEVEA 986

  Fly   404 YLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEK------ASLTALADITTLKKICSH 462
            .||.|.|.||...::|:|..||.:......:   |.|.:||      .:.|.:..|..|:|||:|
  Rat   987 QLPEKVEYVIKCDMSALQRVLYRHMQAKGVL---LTDGSEKDKKGKGGTKTLMNTIMQLRKICNH 1048

  Fly   463 PDLIYEKLTAREKGFENSQNVLPSNYKPKDLNPELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQ 527
            | .:::.:   |:.|...........:..||. ..||||.|||.:|..:||. |.||:|....|.
  Rat  1049 P-YMFQHI---EESFSEHLGFTGGIVQGLDLY-RASGKFELLDRILPKLRAT-NHKVLLFCQMTS 1107

  Fly   528 TLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPESDSFLFMLSSKAGGCGLNLIGANRLF 592
            .:.:.|.....|.:.::|||||...:.|..::..||:|.|:.|:|:||::|||.||||..|:.:.
  Rat  1108 LMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLLKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVI 1172

  Fly   593 MFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQTHKKSLSSTIIDNNESAEK 657
            :||.||||..|.||..|..|.||:....:.||....|:|||||....:|.::...:|......:|
  Rat  1173 IFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQK 1237

  Fly   658 HFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCTSHLSQWYHCSNNRGLPDNI 722
                              |.:|::....:.:..      .|:.|      :..|||...|
  Rat  1238 ------------------SSSHERRAFLQAILE------HEEQD------ESRHCSTGSG----- 1267

  Fly   723 LAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEEKPE 763
                     ..||. |.......:.|..||....:.:|.|:
  Rat  1268 ---------SASFA-HTAPPPAGVNPDLEEPPLKEEDEVPD 1298

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	Rad54_N	<76..>126	CDD:430137	9/49 (18%)
		HepA	<156..650	CDD:440319	165/519 (32%)
		DEXHc_RAD54A	156..396	CDD:350825	76/259 (29%)
Smarca4	XP_063120900.1	None