DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and LOC1270139

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_308811.5 Gene:LOC1270139 / 1270139 VectorBaseID:AGAMI1_008458 Length:954 Species:Anopheles gambiae


Alignment Length:577 Identity:237/577 - (41%)
Similarity:353/577 - (61%) Gaps:38/577 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   122 VLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKR-----GNFNGC 181
            ::...|:: ||:.......:.:|.|.|...::..|||||||||.|:||||.|.|     |  .|.
Mosquito   300 LIMKKPSF-EHQFQHNAQNETVVEVQVPLCVTRHLRPHQREGVAFLYECVTGLRMLEPAG--CGA 361

  Fly   182 IMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPME 246
            |:||||||||||||:.|::|||:.||..||...:.::|:|||||.||::|.||||....:...:.
Mosquito   362 ILADEMGLGKTLQCIALMYTLLKTGPYGKPLAKRVLIVTPSSLVDNWDREITKWLRSERIFTFIV 426

  Fly   247 GGTKENTIRALEQFSMTSARLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNLTYQ 311
            |...:     |::::.:.   ..|:|:||||........|...:..::.||||||||||:...:.
Mosquito   427 GPNNK-----LKRYAQSP---HIPILIISYEMLAKQIGELETVKFDLMFCDEGHRLKNSNVKAFG 483

  Fly   312 ALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDSTEQERQ 376
            .|..|:.:|||||:||||||||.|::||:|||||..:||...||..:|:.|:..|......|..:
Mosquito   484 VLNRLECRRRVLLTGTPIQNDLQEFFSLINFVNPGAIGTYQDFKARYETPIVVSQRPGVLPQSIE 548

  Fly   377 RAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRRSLADC 441
            ..||:..||..:..:.::|||.:::.:|||.|.|:|:....:|:|.:|....|...:        
Mosquito   549 LGIERLNELNAITGRFVLRRTQEVVNRYLPDKHEVVVFCHPSALQTQLTRTALSFYE-------- 605

  Fly   442 NEKASLTALAD---ITTLKKICSHPDLIYEKLTAREKGF-ENSQNVLPSNYKP-KDLNPELSGKF 501
            :||.:..|::.   ||.|||||:||.|:    :.:.||. |:..::|.....| :.:.|..|.|.
Mosquito   606 SEKGADNAVSPLQLITILKKICNHPSLV----SVQGKGDPESLVHLLAEQLPPWQRMGPTDSAKL 666

  Fly   502 MLLDFMLAAIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMSIKKRSKVVDRFNDPE 566
            .:::.:|.|:.|. .:|:|::|.|::|||:...|.....|.:.||||:.:...||::|..||:|.
Mosquito   667 GIVEALLEAMLAM-QEKIVIVSYYSKTLDMIGGLCDHYNYKYCRLDGSTAGPDRSRIVAAFNNPA 730

  Fly   567 SDSFLFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIE 631
            :|||:.:||:||||.|||||||:||.::|.|||||||.|||:|||||||:||.:||||:.:.|||
Mosquito   731 NDSFILLLSAKAGGAGLNLIGASRLVLYDNDWNPANDLQAMSRVWRDGQRKPVFIYRLLTAYSIE 795

  Fly   632 EKILQRQTHKKSLSSTIIDNNES-AEKHFTRDDLKDLFT-FDANILSD--THDKLKC 684
            |:|.|||..|.|||.|::|..:: :....:.::|||||: .|.|..||  ||..|:|
Mosquito   796 ERIFQRQISKTSLSGTVVDQRQNLSNLKLSEEELKDLFSIIDPNAESDCLTHSLLEC 852

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 0/3 (0%)
HepA <156..650 CDD:440319 217/503 (43%)
DEXHc_RAD54A 156..396 CDD:350825 106/244 (43%)
LOC1270139XP_308811.5 None

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