DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment okr and Fsbp

DIOPT Version :9

Sequence 1:	NP_476661.1	Gene:	okr / 33507	FlyBaseID:	FBgn0002989	Length:	784	Species:	Drosophila melanogaster
Sequence 2:	XP_006237955.1	Gene:	Fsbp / 102550523	RGDID:	7611658	Length:	298	Species:	Rattus norvegicus

Alignment Length:	226	Identity:	46/226 - (20%)
Similarity:	91/226 - (40%)	Gaps:	32/226 - (14%)

- Green bases have known domain annotations that are detailed below.

  Fly   128 AYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGVRFMYECVEGKRGNFNGCIMADEMGLGKT 192
            |.::::....:|||.:|.::  |.:|:......|..::........:.|..:..:|.|...:..|
  Rat    89 AQSDYKSSISEPTKKVVEMI--PQISSFCLVRDRNHIQSTNLDEAAQAGTSSLQVMVDHHPVAIT 151

  Fly   193 LQCVTLVWTLLRQGPECKPTINKAIVVSP---SSLVKNWEKEFTKWLHG----RLLCLPMEGGTK 250
            ::        ::|..:.||  :.|:|.||   .:|.:..|.|..:...|    .|..:.|...:.
  Rat   152 VE--------VKQEEDIKP--SPALVSSPQHNDALEQQEEHELMRVAEGSVSPSLSSVDMRMTSS 206

  Fly   251 ENTIRALEQFSMTSA-------RLGTPVLLISYETFRIYAEILCKYEVGMVICDEGHRLKNSDNL 308
            .:::...:.|...|.       |....||.:..|..::..|...|:  |:.:.::...||....|
  Rat   207 PSSVPRRDVFHQESGEHLRSLLRCDPQVLQMLKEEHQLILENQKKF--GLYVQEKRDGLKRRQRL 269

  Fly   309 TYQALMGLKTKRRV-LLSGTPIQNDLTEYYS 338
            ..:.   |:.|..| .|..:.::.||.||.|
  Rat   270 EEEL---LRAKIEVEKLRASRLRRDLPEYSS 297

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
okr	NP_476661.1	SNF2_N	159..466	CDD:278600	39/195 (20%)
		DEXDc	179..328	CDD:238005	32/163 (20%)
		HELICc	493..622	CDD:238034
Fsbp	XP_006237955.1	Myb_DNA-bind_5	6..82	CDD:290584
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	1	1.000	-	-		FOG0001533
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.910