DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment okr and atrx

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:XP_002931858.1 Gene:atrx / 100380046 XenbaseID:XB-GENE-980568 Length:2268 Species:Xenopus tropicalis


Alignment Length:922 Identity:247/922 - (26%)
Similarity:384/922 - (41%) Gaps:282/922 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    13 LRPESRHSFTPPLLKKNKRSCQQELEREQELDRRRLGALRDASNTSELPLPIR----FTANSEYE 73
            ||.|::::     ||:.:...::..|||:|.|:.|...:.|..:.|.:..|:.    ...|.|.:
 Frog  1257 LRTETQNA-----LKEEEERRKRIAERERERDKLRELQVVDTEDVSPVKCPVTTKLVLDENEETK 1316

  Fly    74 LAIAKVLARKFKVPMDNYVPDYGGKRVLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMD 138
            .|:.:|                                                    |::|   
 Frog  1317 EALVQV----------------------------------------------------HQKM--- 1326

  Fly   139 PTKVLVHVVVDPLLSNILRPHQREGVRFMYECV-----EGKRGNFNGCIMADEMGLGKTLQCVTL 198
            .||              |:|||.:||:||::|.     :.|:...:|||:|..||||||||.||.
 Frog  1327 VTK--------------LKPHQVDGVQFMWDCCCESMKKTKKDPGSGCILAHCMGLGKTLQVVTF 1377

  Fly   199 VWTLLRQGPECKPTINKAIVVSPSSLVKNWEKEFTKWLHGRLLCLPMEGGTKEN-----TIRALE 258
            :.|:|...   |...:.|:||.|.:.|.||..||.||..|      |:...|..     |::..:
 Frog  1378 LHTVLLSE---KLDFSTALVVCPLNTVLNWLNEFEKWQDG------MDDEEKLEVCELATVKRPQ 1433

  Fly   259 QFSMTSARLGTP--VLLISYETFR---------------IYAEILCKYEVGMVICDEGHRLKNSD 306
            :.|....|....  :|:|.||.:|               |:.:.|.......|||||||.|||..
 Frog  1434 ERSYMMQRWHQEGGILIIGYEMYRNLTQGRNVKSKKLKEIFHKTLVDPGPDFVICDEGHILKNEL 1498

  Fly   307 NLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFVNPEMLGTAAVFKRNFESAILRGQNTDST 371
            :...:|:..:||:||::|:|||:||:|.||:.:|||:...:||:...|:..|.:.|..||..|||
 Frog  1499 SAISKAMNSIKTRRRIILTGTPLQNNLVEYHCMVNFIKENLLGSIKEFRNRFINPIQNGQCADST 1563

  Fly   372 EQERQRAIEKTQELIGLVDQCIIRRTNQILTKYLPVKFEMVICAKLTAIQLELYTNFLKSDQVRR 436
            ..:.:...::...|..::..|:.||....|||:||.|.|.|:..:::.:|.:||..:|  |.:..
 Frog  1564 LVDVRVMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLSVRISPLQCKLYQYYL--DHLTG 1626

  Fly   437 SLAD--CNEKASLTALADITTLKKICSHP------------------------------------ 463
            ::.:  ...|:......|...|.:|.:||                                    
 Frog  1627 AVGEGGVRGKSGTKLFQDFQVLSRIWTHPWCLQLDYISKENKGYFDEDDSMEEFIASDSEESSMS 1691

  Fly   464 ----DLIYEKLTAREKG-FENSQNVLPSNY---------------KPKDLNP------------- 495
                :.:..|..|:.|| .|||.:...|:.               |.||||.             
 Frog  1692 LSSEEEVVNKKKAKGKGKRENSSSEEESDNDVEVIKVWNSRSRGGKGKDLNDEEASNSPVVPKAE 1756

  Fly   496 ------------------------------ELSGKFMLLDFMLAAIRAEGNDKVVLISNYTQTLD 530
                                          |.|||.|||..:|......| |||::.|....:||
 Frog  1757 ETKATSSSTPGSPAADWYKDFVTEADSSIMEHSGKIMLLFEILRMAEVLG-DKVLVFSQSLISLD 1820

  Fly   531 LFE---QLARK---------------------RKYGFVRLDGTMSIKKRSKVVDRFNDPES-DSF 570
            |.|   :||..                     |...:.||||..|.:.|.|..:.|||..: ...
 Frog  1821 LIEDFLELASTEKNEENASEKPVFYKGDGKWFRNIDYYRLDGQTSPQTRKKWAEEFNDSTNIRGR 1885

  Fly   571 LFMLSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKIL 635
            ||::|:|||..|:||:.|||:.:||..|||:.|.|::.||:|.||.||.::||.:|.|::||||.
 Frog  1886 LFLISTKAGSLGINLVAANRVIIFDASWNPSYDIQSIFRVYRFGQIKPVFVYRFLAQGTMEEKIY 1950

  Fly   636 QRQTHKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPP--PE 698
            .||..|:|||..:|| .:..|:|||.::|.:|:||:.::|.|.:.:.|.||       :.|  |:
 Frog  1951 DRQIAKQSLSFRVID-QQQIERHFTMNELTELYTFEPDLLDDPNSEKKKKR-------ETPMLPK 2007

  Fly   699 DTDCTSHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEEKP- 762
            ||                     :||:.....|.....:|   :...::...||||..:.:.|. 
 Frog  2008 DT---------------------VLAELLQILKEYIVTYH---EHDSLLDHKEEEALTEEDRKAA 2048

  Fly   763 ----ESRKRSST 770
                |:.|:..|
 Frog  2049 WAEYEAEKKGLT 2060

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 1/49 (2%)
HepA <156..650 CDD:440319 194/646 (30%)
DEXHc_RAD54A 156..396 CDD:350825 90/266 (34%)
atrxXP_002931858.1 ADDz_ATRX 166..269 CDD:277252
PTZ00121 <298..1088 CDD:173412
HepA 1182..1965 CDD:440319 216/793 (27%)
DEXHc_ATRX 1330..1573 CDD:350826 88/251 (35%)
Blue background indicates that the domain is not in the aligned region.

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