DRSC/TRiP Functional Genomics Resources

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Protein Alignment okr and ercc6l

DIOPT Version :10

Sequence 1:NP_476661.1 Gene:okr / 33507 FlyBaseID:FBgn0002989 Length:784 Species:Drosophila melanogaster
Sequence 2:NP_001093563.2 Gene:ercc6l / 100005291 ZFINID:ZDB-GENE-060531-56 Length:1444 Species:Danio rerio


Alignment Length:772 Identity:209/772 - (27%)
Similarity:361/772 - (46%) Gaps:132/772 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 ELEREQELDR-RRLGALRDASNTSELPLPIRFTANSEYELAIAKVLARKFKVPMDNYVPDYGGKR 99
            :.|:..:.|| |:.|  ::|:...|||..:..     ::||.....:.|.|            ||
Zfish    20 DTEKMGKYDRYRQKG--KEAALNGELPHALEL-----FQLAYQLQPSEKLK------------KR 65

  Fly   100 VLGVRRCISRRPLHDPMACNALVLFHPPAYTEHERMGMDPTKVLVHVVVDPLLSNILRPHQREGV 164
            :..::..|.|....|..        ....:......|:...|.|...:.|         ||:|||
Zfish    66 IQAIQDLIQREDEEDEE--------EEEEFVNVNNSGLKLYKGLYDKLYD---------HQKEGV 113

  Fly   165 RFMYECV-EGKRGNFNGCIMADEMGLGKTLQCVTLVWTLLRQGPECKPTINKAIVVSPSSLVKNW 228
            .|:|... :|::|.    |:||:||||||:|.::.:     .|.......|..::|.|:||:|||
Zfish   114 AFLYSLYRDGRKGG----ILADDMGLGKTIQVISFL-----SGMYDAELANHTLLVMPTSLIKNW 169

  Fly   229 EKEFTKWLHGRLLCLPMEGGTKENTIRALEQFSMTSARLGT--PVLLISYETFRIYAEILCKYEV 291
            .:||.||..| :......|.:|....|.||:.......:.|  .:|:.:||..........|:: 
Zfish   170 VREFAKWTPG-MRVKEFHGSSKTERNRNLERIQRKGGVIITTYQMLINNYEQLGSNGHREFKWD- 232

  Fly   292 GMVICDEGHRLKNSDNLTYQALMGLKTKRRVLLSGTPIQNDLTEYYSLVNFV-NPEMLGTAAVFK 355
             .||.||.|::|.|...|.::...:..|.||||:|||:||:|.|.::|.:|. ...:|||:..||
Zfish   233 -YVILDEAHKIKTSSTKTAKSAHAIPAKNRVLLTGTPVQNNLREMWALFDFACQGSLLGTSKTFK 296

  Fly   356 RNFESAILRGQNTDSTEQERQRAIEKTQELIGLVDQCIIRRTN-QILTKYLPV------------ 407
            ..:|:.|.|.:..|:|..|:...:..:|.|..::....:|||. .:..|.|.:            
Zfish   297 TEYENPITRAREKDATPGEKALGLRISQNLTDIIKPYFLRRTKADVQQKKLKLEEGFEEEEDQEN 361

  Fly   408 ----------------KFEMVICAKLTAIQLELYTNFLKSDQVRRSLADCNEKASLTALADITTL 456
                            |.::::...|:::|.::|..|:..||::..|.     .:.:.||::|.|
Zfish   362 KCPNAREGVEMPSLTRKNDLIVWTYLSSVQEDIYNKFISLDQIKELLT-----TTRSPLAELTVL 421

  Fly   457 KKICSHPDLIYEKLTAR---EKGFEN-------SQNVLP--SNYKPKDLNPELSGKFMLLDFMLA 509
            ||:|.||.|:.::...:   |:|.::       |::.:.  .|.....|..| |||...:..::.
Zfish   422 KKLCDHPRLLSQRAVIQLGLERGSDSELVHSDESESAVSQIDNISDHTLIEE-SGKLQFVVSLME 485

  Fly   510 AIRAEGNDKVVLISNYTQTLDLFEQLARKRKYGFVRLDGTMS-IKKRSKVVDRFNDPESDSFLFM 573
            .:|.||: :.::.|...:.||:.|::.|.|.:..:|||||:: :.:|.|.:..|...:..: :|:
Zfish   486 CLREEGH-RTLIFSQSRKMLDIMERVLRNRNFRLLRLDGTVTQLAEREKRISLFQTDKRYT-IFL 548

  Fly   574 LSSKAGGCGLNLIGANRLFMFDPDWNPANDEQAMARVWRDGQKKPCYIYRLVASGSIEEKILQRQ 638
            |:::.||.|:.|.||||:.:|||.||||.|.||:.|.:|.||.:...||||:..|::||||.:||
Zfish   549 LTTQVGGVGITLTGANRVVIFDPSWNPATDAQAVDRAYRIGQTENVIIYRLITCGTVEEKIYRRQ 613

  Fly   639 THKKSLSSTIIDNNESAEKHFTRDDLKDLFTFDANILSDTHDKLKCKRCVQNIQMKPPPEDTDCT 703
            ..|.||......:.::..::|::.:|::||..:....|.|..:|      |.:..:....||...
Zfish   614 VFKDSLIRQTTGDKKNPFRYFSKQELRELFKLEDTRSSSTQQQL------QAMHAQSRRSDTSLD 672

  Fly   704 SHLSQWYHCSNNRGLPDNILAQAWMDCKCVSFVFHHRSQAQEIVPSAEEEATDQPEE 760
            .|::: .|.....|:.|                 |.....:|  |:|:|   |.||:
Zfish   673 HHIAR-LHSMEMFGISD-----------------HDLMFTKE--PAADE---DDPED 706

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
okrNP_476661.1 Rad54_N <76..>126 CDD:430137 7/49 (14%)
HepA <156..650 CDD:440319 165/539 (31%)
DEXHc_RAD54A 156..396 CDD:350825 78/243 (32%)
ercc6lNP_001093563.2 TPR 1 27..60 10/39 (26%)
DEAH box 237..240 2/2 (100%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 647..669 4/27 (15%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 778..804
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 928..999
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1028..1047
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1056..1076
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1089..1133
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1175..1336
TPR 2 1395..1428
Blue background indicates that the domain is not in the aligned region.

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