Sequence 1: | NP_001245851.1 | Gene: | Chd1 / 33505 | FlyBaseID: | FBgn0250786 | Length: | 1900 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_649111.1 | Gene: | Chd3 / 40111 | FlyBaseID: | FBgn0023395 | Length: | 892 | Species: | Drosophila melanogaster |
Alignment Length: | 849 | Identity: | 345/849 - (40%) |
---|---|---|---|
Similarity: | 496/849 - (58%) | Gaps: | 123/849 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 373 EKQTPDAETEAQFLIKWKGWSYIHNTWESEATL--------------RDMKAKGMKKLDNFIKKE 423
Fly 424 KEQAYWRRYAGPEDIDYFECQLELQHELLKSYNNVDRIIAKGSKPDDGTEEYLCKWQSLPYAEST 488
Fly 489 WE---------DAALVLRKWQRCAEQFNDRESSKCTPSRHCRVIKYRPKFSRIKNQPEFL-SSGL 543
Fly 544 TLRDYQMDGLNWLLHSWCKENSVILADEMGLGKTIQTICFLYSLFKIHHLYGPFLCVVPLSTMTA 608
Fly 609 WQREFDLWAPDMNVVTYLGDIKSRELIQQYEWQF---------ESSKRLKFNCILTTYEIVLKDK 664
Fly 665 QFLGTLQWAALLVDEAHRLKNDDSLLYKSLKEFDTNHRLLITGTPLQNSLKELWALLHFIMPDKF 729
Fly 730 DTWENFEVQHGN-AEDKGYTRLHQQLEPYILRRVKKDVEKSLPAKVEQILRVEMTSLQKQYYKWI 793
Fly 794 LTKNFDALRKGKRGSTSTFLNIVIELKKCCNH---------AALIRPSEFELMGLQQDEALQTLL 849
Fly 850 KGSGKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQALDH 914
Fly 915 FNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQVNIYRLVT 979
Fly 980 ARSVEEQIVERAKQKMVLDHLVIQRMDTTGRTVLDKSGNGHSSNSNPFNKDDLSAILKFGAEELF 1044
Fly 1045 KDEQ----EHDDDLVCDIDEILRRAETRNEDPEMPADDLLSAFKVASIAAFEEEPSDSVSKQDQN 1105
Fly 1106 AAGEEDDSKDWDDIIPEGFRKAIDDQERAKEMEDLYLPPRRKTAANQN--EGKRGAGKGGKGKQQ 1168
Fly 1169 ADDS 1172 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
Chd1 | NP_001245851.1 | CHROMO | 374..422 | CDD:237991 | 15/61 (25%) |
Chromo | 458..509 | CDD:278797 | 19/59 (32%) | ||
SNF2_N | 548..829 | CDD:278600 | 141/299 (47%) | ||
DEXDc | 564..709 | CDD:238005 | 76/153 (50%) | ||
Helicase_C | 852..967 | CDD:278689 | 74/114 (65%) | ||
DUF4208 | 1521..1610 | CDD:290618 | |||
DUF3824 | 1795..>1894 | CDD:289625 | |||
Chd3 | NP_649111.1 | PHD2_CHD_II | 37..79 | CDD:277007 | |
CHROMO | 85..147 | CDD:237991 | 12/45 (27%) | ||
CHROMO | 181..233 | CDD:214605 | 18/52 (35%) | ||
SNF2_N | 270..561 | CDD:278600 | 140/290 (48%) | ||
DEXDc | 288..440 | CDD:238005 | 76/151 (50%) | ||
Helicase_C | 585..700 | CDD:278689 | 74/114 (65%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C45467211 | |
Domainoid | 1 | 1.000 | 47 | 1.000 | Domainoid score | I705 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 1 | 1.000 | - | - | otm46623 | |
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 1 | 1.100 | - | - | P | PTHR45623 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.940 |