DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG3165 and dnaQ

DIOPT Version :10

Sequence 1:NP_608732.1 Gene:CG3165 / 33503 FlyBaseID:FBgn0031484 Length:351 Species:Drosophila melanogaster
Sequence 2:NP_414751.1 Gene:dnaQ / 946441 ECOCYCID:EG10243 Length:243 Species:Escherichia coli


Alignment Length:184 Identity:40/184 - (21%)
Similarity:73/184 - (39%) Gaps:64/184 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VLDLETTNL----PAYRNNRVSITELCIYAFEAALLKKKKKEQDQDEQQELPAAPRVLHKL---- 78
            |||.|||.:    ..|..:::.                           |:.|...|..:|    
E. coli    10 VLDTETTGMNQIGAHYEGHKII---------------------------EIGAVEVVNRRLTGNN 47

  Fly    79 -NVLFQPSMVVDPEAERITGLSN-YLLERESQLDTDAAQLIVSFLKHLPSPVCLVAHNGWGFDFP 141
             :|..:|..:|||||..:.|::: :||::.:     .|::...|:.::.... ||.||. .||..
E. coli    48 FHVYLKPDRLVDPEAFGVHGIADEFLLDKPT-----FAEVADEFMDYIRGAE-LVIHNA-AFDIG 105

  Fly   142 ILRQAFEKLNIELPQSLT-C-------------------VDSLRAFMEIDDTQQ 175
            .:...|..|..::|::.| |                   :|:|.|..|||::::
E. coli   106 FMDYEFSLLKRDIPKTNTFCKVTDSLAVARKMFPGKRNSLDALCARYEIDNSKR 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG3165NP_608732.1 TREX1_2 20..173 CDD:99839 40/180 (22%)
dnaQNP_414751.1 PRK05711 3..243 CDD:235574 40/184 (22%)

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